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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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Download
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
80 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV182649496
OJMG01008883
24650
Bacillota
TAA
Leu
>WENV182649959
OJMG01028542
155958
Bacillota
GAT
Ile
>WENV182649071
OJMG01002366
156958
Bacillota
GAT
Ile
>WENV182649918
OJMG01025550
158247
Bacillota
>WENV182648847
OJMG01000929
37213
Bacillota
TGA
Ser
>WENV182649190
OJMG01003708
235134
Bacillota
GAA
Phe
>WENV182648490
OJMG01000114
339890
Bacillota
TTG
Gln
>WENV182650285
OJMG01071738
156189
Bacillota
GAT
Ile
>WENV182649854
OJMG01022199
235098
Bacillota
GAC
Val
>WENV182649468
OJMG01007984
338152
Bacillota
TTC
Glu
>WENV182650185
OJMG01053876
44854
Bacillota
TGA
Ser
>WENV182650157
OJMG01049141
235154
Bacillota
GTT
Asn
>WENV182648783
OJMG01000747
59312
Bacillota
CAG
Leu
>WENV182648845
OJMG01000922
59312
Bacillota
CAG
Leu
>WENV182648412
OJMG01000038
338147
Bacillota
CTC
Glu
>WENV182648875
OJMG01001056
338147
Bacillota
CTC
Glu
>WENV182649050
OJMG01002141
338147
Bacillota
CTC
Glu
>WENV182649051
OJMG01002141
338147
Bacillota
CTC
Glu
>WENV182649076
OJMG01002398
338147
Bacillota
CTC
Glu
>WENV182650207
OJMG01055770
235150
Bacillota
TGC
Ala
>WENV182649237
OJMG01004361
340802
Bacillota
TTG
Gln
>WENV182649588
OJMG01011625
345329
Bacillota
TTC
Glu
>WENV182650164
OJMG01050123
177274
Bacillota
CAT
Met
>WENV182648672
OJMG01000379
235114
Bacillota
TTT
Lys
>WENV182648817
OJMG01000835
235114
Bacillota
TTT
Lys
>WENV182650113
OJMG01043238
11034
Bacillota
GGA
Ser
>WENV182649865
OJMG01022523
274189
Bacillota
TGT
Thr
>WENV182649200
OJMG01003849
235079
Bacillota
GAA
Phe
>WENV182649747
OJMG01017118
173314
Bacillota
GAT
Ile
>WENV182649646
OJMG01013594
338149
Bacillota
CTC
Glu
>WENV182649953
OJMG01028281
245298
Bacillota
CGG
Pro
>WENV182649235
OJMG01004335
152492
Bacillota
GGG
Pro
>WENV182649506
OJMG01009148
152492
Bacillota
GGG
Pro
>WENV182649198
OJMG01003849
235078
Bacillota
TAC
Val
>WENV182648815
OJMG01000835
144610
Bacillota
GTG
His
>WENV182649191
OJMG01003708
240017
Bacillota
GCC
Gly
>WENV182649952
OJMG01028281
411547
Bacillota
CTG
Gln
>WENV182649123
OJMG01002803
147684
Bacillota
ACG
Arg
>WENV182649251
OJMG01004685
147684
Bacillota
ACG
Arg
>WENV182650186
OJMG01053876
4624
Bacillota
GCT
Ser
>WENV182649188
OJMG01003708
263765
Bacillota
TAC
Val
>WENV182649464
OJMG01007888
412387
Bacillota
GCA
Cys
>WENV182648913
OJMG01001377
18852
Bacillota
GCT
Ser
>WENV182649427
OJMG01007180
235095
Bacillota
GGT
Thr
>WENV182649797
OJMG01019141
419945
Bacillota
GCA
Cys
>WENV182650110
OJMG01043117
411549
Bacillota
TTG
Gln
>WENV182648864
OJMG01000991
235142
Bacillota
CTT
Lys
>WENV182649151
OJMG01003176
235142
Bacillota
CTT
Lys
>WENV182650264
OJMG01066634
59296
Bacillota
AAG
Leu
>WENV182649756
OJMG01017558
148188
Bacillota
CCG
Arg
>WENV182650278
OJMG01070167
249522
Bacillota
TAC
Val
>WENV182650008
OJMG01032069
338129
Bacillota
TGT
Thr
>WENV182648579
OJMG01000248
157838
Bacillota
GTC
Asp
>WENV182648747
OJMG01000604
157838
Bacillota
GTC
Asp
>WENV182648901
OJMG01001287
247734
Bacillota
TGC
Ala
>WENV182649493
OJMG01008774
419877
Bacillota
TCC
Gly
>WENV182649980
OJMG01029851
144621
Bacillota
GTT
Asn
>WENV182648671
OJMG01000379
235113
Bacillota
GAA
Phe
>WENV182648691
OJMG01000413
235113
Bacillota
GAA
Phe
>WENV182648440
OJMG01000056
277200
Bacillota
GGC
Ala
>WENV182648375
OJMG01000023
243098
Bacillota
GGT
Thr
>WENV182649595
OJMG01011983
58712
Bacillota
CAG
Leu
>WENV182650261
OJMG01066291
157719
Bacillota
CAT
Met
>WENV182650347
OJMG01086504
245296
Bacillota
CCC
Gly
>WENV182649647
OJMG01013594
272992
Bacillota
CTT
Lys
>WENV182648411
OJMG01000034
344240
Bacillota
GCC
Gly
>WENV182648669
OJMG01000379
95563
Bacillota
GTA
Tyr
>WENV182648974
OJMG01001710
95563
Bacillota
GTA
Tyr
>WENV182649029
OJMG01002036
338127
Bacillota
TTG
Gln
>WENV182648924
OJMG01001412
272488
Bacillota
GAA
Phe
>WENV182649776
OJMG01018236
114075
Bacillota
TAG
Leu
>WENV182650249
OJMG01064144
119513
Bacillota
CAA
Leu
>WENV182648895
OJMG01001275
238945
Bacillota
GCC
Gly
>WENV182648896
OJMG01001275
238945
Bacillota
GCC
Gly
>WENV182649746
OJMG01017118
273862
Bacillota
TGC
Ala
>WENV182649795
OJMG01019132
273862
Bacillota
TGC
Ala
>WENV182649149
OJMG01003164
338330
Bacillota
GCA
Cys
>WENV182649389
OJMG01006361
338128
Bacillota
TTC
Glu
>WENV182649826
OJMG01020865
338128
Bacillota
TTC
Glu
>WENV182648943
OJMG01001522
245344
Bacillota
GAA
Phe
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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