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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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Download
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
42 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV182834983
OKFJ01000205
243647
Bacillota
TTT
Lys
>WENV182835045
OKFJ01001841
16842
Bacillota
CGA
Ser
>WENV182835046
OKFJ01001909
339904
Bacillota
GCC
Gly
>WENV182835088
OKFJ01008221
146699
Bacillota
TCG
Arg
>WENV182835080
OKFJ01007756
18465
Bacillota
GCT
Ser
>WENV182835025
OKFJ01001565
338544
Bacillota
TGT
Thr
>WENV182835013
OKFJ01000646
237286
Bacillota
CTT
Lys
>WENV182835028
OKFJ01001565
162003
Bacillota
GTC
Asp
>WENV182835062
OKFJ01004533
243346
Bacillota
TGC
Ala
>WENV182835010
OKFJ01000646
113680
Bacillota
TAG
Leu
>WENV182835064
OKFJ01004577
16285
Bacillota
GCT
Ser
>WENV182835029
OKFJ01001565
338208
Bacillota
>WENV182835054
OKFJ01002455
16235
Bacillota
>WENV182835050
OKFJ01001909
235903
Bacillota
TTT
Lys
>WENV182835072
OKFJ01005994
419288
Bacillota
GGT
Thr
>WENV182835021
OKFJ01000918
23437
Bacillota
GGA
Ser
>WENV182835012
OKFJ01000646
412107
Bacillota
TCC
Gly
>WENV182835015
OKFJ01000704
16834
Bacillota
GCT
Ser
>WENV182835024
OKFJ01001565
186380
Bacillota
GTC
Asp
>WENV182834980
OKFJ01000192
114002
Bacillota
CAA
Leu
>WENV182835020
OKFJ01000838
37437
Bacillota
TAA
Leu
>WENV182835049
OKFJ01001909
338548
Bacillota
TTG
Gln
>WENV182835036
OKFJ01001646
338555
Bacillota
CCT
Arg
>WENV182834971
OKFJ01000098
342895
Bacillota
CAT
Met
>WENV182835070
OKFJ01005409
147692
Bacillota
TCG
Arg
>WENV182834989
OKFJ01000311
367412
Bacillota
GTT
Asn
>WENV182835075
OKFJ01006432
250349
Bacillota
GAA
Phe
>WENV182835011
OKFJ01000646
339363
Bacillota
GCC
Gly
>WENV182835022
OKFJ01001154
238413
Bacillota
GGT
Thr
>WENV182835074
OKFJ01006432
235197
Bacillota
GTC
Asp
>WENV182835018
OKFJ01000838
368876
Bacillota
GCC
Gly
>WENV182835047
OKFJ01001909
411739
Bacillota
TCC
Gly
>WENV182834981
OKFJ01000205
243613
Bacillota
GTG
His
>WENV182834976
OKFJ01000121
152491
Bacillota
CAT
Met
>WENV182835030
OKFJ01001565
144762
Bacillota
TCT
Arg
>WENV182834972
OKFJ01000121
273029
Bacillota
TGT
Thr
>WENV182834975
OKFJ01000121
281472
Bacillota
GGT
Thr
>WENV182835079
OKFJ01007756
16361
Bacillota
TGA
Ser
>WENV182835026
OKFJ01001565
338545
Bacillota
>WENV182834979
OKFJ01000179
413657
Bacillota
CCC
Gly
>WENV182834982
OKFJ01000205
343027
Bacillota
TTG
Gln
>WENV182835009
OKFJ01000646
237283
Bacillota
TTT
Lys
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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