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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
30 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV182863343
OKPS01000339
147158
Actinomycetota
TTT
Lys
>WENV182863275
OKPS01000063
290172
Actinomycetota
TGC
Ala
>WENV182863330
OKPS01000226
121519
Actinomycetota
TTG
Gln
>WENV182863417
OKPS01007578
147155
Actinomycetota
GTC
Asp
>WENV182863264
OKPS01000040
237816
Actinomycetota
GGT
Thr
>WENV182863414
OKPS01005416
304559
Actinomycetota
GCC
Gly
>WENV182863261
OKPS01000033
37209
Actinomycetota
GAG
Leu
>WENV182863321
OKPS01000175
147157
Actinomycetota
TAC
Val
>WENV182863224
OKPS01000002
80900
Actinomycetota
TGA
Ser
>WENV182863298
OKPS01000102
80900
Actinomycetota
TGA
Ser
>WENV182863416
OKPS01005416
339641
Actinomycetota
GAC
Val
>WENV182863230
OKPS01000003
415620
Actinomycetota
TCC
Gly
>WENV182863270
OKPS01000048
428901
Actinomycetota
CCC
Gly
>WENV182863359
OKPS01000547
428901
Actinomycetota
CCC
Gly
>WENV182863320
OKPS01000173
435035
Actinomycetota
TCC
Gly
>WENV182863346
OKPS01000389
339640
Actinomycetota
CTG
Gln
>WENV182863300
OKPS01000102
289966
Actinomycetota
ACG
Arg
>WENV182863236
OKPS01000007
121553
Actinomycetota
TTG
Gln
>WENV182863257
OKPS01000025
98145
Actinomycetota
TAG
Leu
>WENV182863256
OKPS01000025
237815
Actinomycetota
CTT
Lys
>WENV182863322
OKPS01000198
80899
Actinomycetota
CAG
Leu
>WENV182863315
OKPS01000155
147156
Actinomycetota
GAA
Phe
>WENV182863336
OKPS01000253
147156
Actinomycetota
GAA
Phe
>WENV182863273
OKPS01000055
237804
Actinomycetota
TGT
Thr
>WENV182863265
OKPS01000040
338489
Actinomycetota
CAT
Met
>WENV182863226
OKPS01000002
277617
Actinomycetota
ACG
Arg
>WENV182863260
OKPS01000031
184545
Actinomycetota
GAT
Ile
>WENV182863269
OKPS01000047
237803
Actinomycetota
CGT
Thr
>WENV182863245
OKPS01000015
237812
Actinomycetota
CTC
Glu
>WENV182863227
OKPS01000002
45149
Actinomycetota
CGA
Ser
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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