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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
94 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV183169140
OLPA01001293
24650
Bacillota
TAA
Leu
>WENV183169248
OLPA01001872
155958
Bacillota
GAT
Ile
>WENV183169676
OLPA01007315
202812
Bacillota
CAT
Met
>WENV183169575
OLPA01005295
158247
Bacillota
>WENV183168822
OLPA01000266
144612
Bacillota
TCT
Arg
>WENV183169693
OLPA01007608
235134
Bacillota
GAA
Phe
>WENV183170159
OLPA01038798
235287
Bacillota
TTT
Lys
>WENV183169154
OLPA01001369
235098
Bacillota
GAC
Val
>WENV183170195
OLPA01044522
98228
Bacillota
TAG
Leu
>WENV183170311
OLPA01070405
250201
Bacillota
TGC
Ala
>WENV183170176
OLPA01041131
44854
Bacillota
TGA
Ser
>WENV183168977
OLPA01000638
235154
Bacillota
GTT
Asn
>WENV183170333
OLPA01075079
359540
Bacillota
GTT
Asn
>WENV183170308
OLPA01069548
144577
Bacillota
GAT
Ile
>WENV183169187
OLPA01001573
304022
Bacillota
GCC
Gly
>WENV183169192
OLPA01001578
304022
Bacillota
GCC
Gly
>WENV183169311
OLPA01002368
429443
Bacillota
GCA
Cys
>WENV183170136
OLPA01035788
429443
Bacillota
GCA
Cys
>WENV183169826
OLPA01012796
307003
Bacillota
TGC
Ala
>WENV183168833
OLPA01000274
59312
Bacillota
CAG
Leu
>WENV183169141
OLPA01001314
59312
Bacillota
CAG
Leu
>WENV183169647
OLPA01006589
238910
Bacillota
CTT
Lys
>WENV183168740
OLPA01000149
338147
Bacillota
CTC
Glu
>WENV183169049
OLPA01000871
338147
Bacillota
CTC
Glu
>WENV183169552
OLPA01004885
338147
Bacillota
CTC
Glu
>WENV183168893
OLPA01000423
155273
Bacillota
CAT
Met
>WENV183169572
OLPA01005205
340802
Bacillota
TTG
Gln
>WENV183169695
OLPA01007608
339584
Bacillota
GCA
Cys
>WENV183169561
OLPA01005041
144668
Bacillota
GTC
Asp
>WENV183169445
OLPA01003426
429429
Bacillota
CCA
Trp
>WENV183169512
OLPA01004201
429429
Bacillota
CCA
Trp
>WENV183169564
OLPA01005066
429429
Bacillota
CCA
Trp
>WENV183169909
OLPA01016359
148104
Bacillota
CAT
Met
>WENV183170155
OLPA01038798
379268
Bacillota
TTC
Glu
>WENV183169562
OLPA01005041
41154
Bacillota
TAA
Leu
>WENV183168832
OLPA01000274
44859
Bacillota
AAG
Leu
>WENV183170397
OLPA01099592
11034
Bacillota
GGA
Ser
>WENV183169619
OLPA01006012
247057
Bacillota
TGC
Ala
>WENV183170158
OLPA01038798
235290
Bacillota
TTG
Gln
>WENV183168625
OLPA01000023
274189
Bacillota
TGT
Thr
>WENV183169186
OLPA01001573
235079
Bacillota
GAA
Phe
>WENV183170271
OLPA01055578
235079
Bacillota
GAA
Phe
>WENV183170085
OLPA01031027
114440
Bacillota
TAG
Leu
>WENV183170330
OLPA01075079
144763
Bacillota
TGG
Pro
>WENV183170193
OLPA01044026
173314
Bacillota
GAT
Ile
>WENV183170296
OLPA01065557
245298
Bacillota
CGG
Pro
>WENV183169744
OLPA01009250
37269
Bacillota
TGA
Ser
>WENV183169989
OLPA01022308
155089
Bacillota
CAT
Met
>WENV183168712
OLPA01000106
287000
Bacillota
GTT
Asn
>WENV183168713
OLPA01000106
287000
Bacillota
GTT
Asn
>WENV183169998
OLPA01023011
287000
Bacillota
GTT
Asn
>WENV183169530
OLPA01004440
413152
Bacillota
TCC
Gly
>WENV183169995
OLPA01022952
162445
Bacillota
CAT
Met
>WENV183170384
OLPA01094904
152492
Bacillota
GGG
Pro
>WENV183169691
OLPA01007608
235078
Bacillota
TAC
Val
>WENV183170295
OLPA01065557
411547
Bacillota
CTG
Gln
>WENV183170177
OLPA01041131
4624
Bacillota
GCT
Ser
>WENV183169173
OLPA01001505
263765
Bacillota
TAC
Val
>WENV183169978
OLPA01021323
412387
Bacillota
GCA
Cys
>WENV183170156
OLPA01038798
411584
Bacillota
TCC
Gly
>WENV183170313
OLPA01070455
235095
Bacillota
GGT
Thr
>WENV183168676
OLPA01000062
344183
Bacillota
CTG
Gln
>WENV183169715
OLPA01008248
198159
Bacillota
CAT
Met
>WENV183169174
OLPA01001505
154748
Bacillota
GTC
Asp
>WENV183170370
OLPA01089161
411549
Bacillota
TTG
Gln
>WENV183168745
OLPA01000158
235142
Bacillota
CTT
Lys
>WENV183168964
OLPA01000577
235142
Bacillota
CTT
Lys
>WENV183170243
OLPA01050946
59296
Bacillota
AAG
Leu
>WENV183170331
OLPA01075079
144767
Bacillota
GTG
His
>WENV183169183
OLPA01001544
148188
Bacillota
CCG
Arg
>WENV183169929
OLPA01017960
236012
Bacillota
GTC
Asp
>WENV183168754
OLPA01000169
235127
Bacillota
TTT
Lys
>WENV183169748
OLPA01009404
163943
Bacillota
GTC
Asp
>WENV183170144
OLPA01037386
241432
Bacillota
TGT
Thr
>WENV183169716
OLPA01008248
235506
Bacillota
TGC
Ala
>WENV183169945
OLPA01018666
237963
Bacillota
TTT
Lys
>WENV183170008
OLPA01023962
338129
Bacillota
TGT
Thr
>WENV183169268
OLPA01001955
157838
Bacillota
GTC
Asp
>WENV183170233
OLPA01049568
144652
Bacillota
GTC
Asp
>WENV183170300
OLPA01067440
247734
Bacillota
TGC
Ala
>WENV183169911
OLPA01016601
419877
Bacillota
TCC
Gly
>WENV183169910
OLPA01016601
238974
Bacillota
GAA
Phe
>WENV183169037
OLPA01000829
235113
Bacillota
GAA
Phe
>WENV183170132
OLPA01035345
157719
Bacillota
CAT
Met
>WENV183170157
OLPA01038798
144762
Bacillota
TCT
Arg
>WENV183168726
OLPA01000123
248965
Bacillota
GCC
Gly
>WENV183170192
OLPA01044026
299139
Bacillota
TGC
Ala
>WENV183169973
OLPA01020808
144594
Bacillota
CAC
Val
>WENV183168847
OLPA01000295
95563
Bacillota
GTA
Tyr
>WENV183168753
OLPA01000169
272488
Bacillota
GAA
Phe
>WENV183168661
OLPA01000053
119513
Bacillota
CAA
Leu
>WENV183169290
OLPA01002176
338128
Bacillota
TTC
Glu
>WENV183169408
OLPA01003250
338128
Bacillota
TTC
Glu
>WENV183170131
OLPA01035073
338128
Bacillota
TTC
Glu
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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