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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
137 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV183280660
OLSB01008634
24650
Bacillota
TAA
Leu
>WENV183280371
OLSB01003796
196621
Bacillota
GTC
Asp
>WENV183281226
OLSB01051539
155958
Bacillota
GAT
Ile
>WENV183279673
OLSB01000730
202812
Bacillota
CAT
Met
>WENV183279801
OLSB01001032
202812
Bacillota
CAT
Met
>WENV183279825
OLSB01001092
309417
Bacillota
GGC
Ala
>WENV183280416
OLSB01004309
352996
Bacillota
TTC
Glu
>WENV183279134
OLSB01000045
37213
Bacillota
TGA
Ser
>WENV183280620
OLSB01007730
155111
Bacillota
CAT
Met
>WENV183280530
OLSB01005767
235134
Bacillota
GAA
Phe
>WENV183280262
OLSB01003008
235287
Bacillota
TTT
Lys
>WENV183280625
OLSB01007783
339890
Bacillota
TTG
Gln
>WENV183279970
OLSB01001494
235098
Bacillota
GAC
Val
>WENV183280197
OLSB01002662
235098
Bacillota
GAC
Val
>WENV183281080
OLSB01031627
338152
Bacillota
TTC
Glu
>WENV183280332
OLSB01003508
44854
Bacillota
TGA
Ser
>WENV183281099
OLSB01033165
235154
Bacillota
GTT
Asn
>WENV183279851
OLSB01001155
304022
Bacillota
GCC
Gly
>WENV183279089
OLSB01000026
347827
Bacillota
TTC
Glu
>WENV183279104
OLSB01000032
307003
Bacillota
TGC
Ala
>WENV183279202
OLSB01000083
59312
Bacillota
CAG
Leu
>WENV183279523
OLSB01000435
59312
Bacillota
CAG
Leu
>WENV183280830
OLSB01014026
239080
Bacillota
CTG
Gln
>WENV183279178
OLSB01000068
338147
Bacillota
CTC
Glu
>WENV183279221
OLSB01000106
338147
Bacillota
CTC
Glu
>WENV183279561
OLSB01000507
338147
Bacillota
CTC
Glu
>WENV183281219
OLSB01050445
235150
Bacillota
TGC
Ala
>WENV183279463
OLSB01000353
155273
Bacillota
CAT
Met
>WENV183280351
OLSB01003594
235294
Bacillota
TGC
Ala
>WENV183280342
OLSB01003534
340802
Bacillota
TTG
Gln
>WENV183280303
OLSB01003242
186612
Bacillota
ACG
Arg
>WENV183280714
OLSB01010263
388249
Bacillota
GCA
Cys
>WENV183280073
OLSB01002002
429429
Bacillota
CCA
Trp
>WENV183281341
OLSB01074978
148104
Bacillota
CAT
Met
>WENV183280256
OLSB01003008
379268
Bacillota
TTC
Glu
>WENV183280923
OLSB01019560
313454
Bacillota
GAA
Phe
>WENV183280194
OLSB01002624
41154
Bacillota
TAA
Leu
>WENV183279200
OLSB01000083
44859
Bacillota
AAG
Leu
>WENV183279201
OLSB01000083
44859
Bacillota
AAG
Leu
>WENV183280379
OLSB01003894
11034
Bacillota
GGA
Ser
>WENV183280287
OLSB01003143
239076
Bacillota
GAA
Phe
>WENV183281257
OLSB01057787
247057
Bacillota
TGC
Ala
>WENV183280261
OLSB01003008
392638
Bacillota
TGT
Thr
>WENV183279960
OLSB01001473
274189
Bacillota
TGT
Thr
>WENV183280824
OLSB01013707
274189
Bacillota
TGT
Thr
>WENV183279850
OLSB01001155
235079
Bacillota
GAA
Phe
>WENV183280344
OLSB01003534
114440
Bacillota
TAG
Leu
>WENV183281249
OLSB01056472
173314
Bacillota
GAT
Ile
>WENV183280570
OLSB01006550
199366
Bacillota
CAT
Met
>WENV183280211
OLSB01002713
245298
Bacillota
CGG
Pro
>WENV183281022
OLSB01026454
245298
Bacillota
CGG
Pro
>WENV183280457
OLSB01004905
340131
Bacillota
GTT
Asn
>WENV183279155
OLSB01000058
287000
Bacillota
GTT
Asn
>WENV183279490
OLSB01000379
287000
Bacillota
GTT
Asn
>WENV183280922
OLSB01019560
169968
Bacillota
CAT
Met
>WENV183280592
OLSB01007081
413152
Bacillota
TCC
Gly
>WENV183281285
OLSB01063513
201704
Bacillota
GAT
Ile
>WENV183279678
OLSB01000735
152492
Bacillota
GGG
Pro
>WENV183280569
OLSB01006550
81373
Bacillota
GTA
Tyr
>WENV183280341
OLSB01003534
144610
Bacillota
GTG
His
>WENV183279018
OLSB01000006
240017
Bacillota
GCC
Gly
>WENV183279354
OLSB01000200
411547
Bacillota
CTG
Gln
>WENV183280210
OLSB01002713
411547
Bacillota
CTG
Gln
>WENV183280822
OLSB01013660
411547
Bacillota
CTG
Gln
>WENV183281021
OLSB01026454
411547
Bacillota
CTG
Gln
>WENV183280168
OLSB01002407
147684
Bacillota
ACG
Arg
>WENV183280333
OLSB01003508
4624
Bacillota
GCT
Ser
>WENV183279194
OLSB01000080
263765
Bacillota
TAC
Val
>WENV183279399
OLSB01000248
263765
Bacillota
TAC
Val
>WENV183280654
OLSB01008531
412387
Bacillota
GCA
Cys
>WENV183280257
OLSB01003008
411584
Bacillota
TCC
Gly
>WENV183280258
OLSB01003008
313104
Bacillota
TAC
Val
>WENV183279100
OLSB01000029
248683
Bacillota
TTT
Lys
>WENV183281395
OLSB01093912
126732
Bacillota
GGG
Pro
>WENV183280160
OLSB01002370
235095
Bacillota
GGT
Thr
>WENV183280372
OLSB01003796
235095
Bacillota
GGT
Thr
>WENV183281053
OLSB01029089
419945
Bacillota
GCA
Cys
>WENV183280489
OLSB01005117
239832
Bacillota
TGT
Thr
>WENV183281332
OLSB01072475
198159
Bacillota
CAT
Met
>WENV183280398
OLSB01004143
96694
Bacillota
TAG
Leu
>WENV183281019
OLSB01026374
239079
Bacillota
TAC
Val
>WENV183279618
OLSB01000627
301896
Bacillota
TAC
Val
>WENV183280260
OLSB01003008
235289
Bacillota
GTT
Asn
>WENV183279834
OLSB01001116
411549
Bacillota
TTG
Gln
>WENV183280170
OLSB01002414
235142
Bacillota
CTT
Lys
>WENV183279073
OLSB01000020
245386
Bacillota
CCA
Trp
>WENV183281182
OLSB01043477
59296
Bacillota
AAG
Leu
>WENV183280124
OLSB01002192
154711
Bacillota
TGG
Pro
>WENV183279798
OLSB01001014
148188
Bacillota
CCG
Arg
>WENV183280553
OLSB01006243
148188
Bacillota
CCG
Arg
>WENV183279417
OLSB01000286
298639
Bacillota
GTT
Asn
>WENV183280330
OLSB01003488
80612
Bacillota
GTA
Tyr
>WENV183279631
OLSB01000632
256380
Bacillota
>WENV183279816
OLSB01001065
163943
Bacillota
GTC
Asp
>WENV183281034
OLSB01027662
241432
Bacillota
TGT
Thr
>WENV183279694
OLSB01000770
235124
Bacillota
TGG
Pro
>WENV183281336
OLSB01073014
235506
Bacillota
TGC
Ala
>WENV183281171
OLSB01041196
241526
Bacillota
CTT
Lys
>WENV183280219
OLSB01002794
338129
Bacillota
TGT
Thr
>WENV183280468
OLSB01004980
359755
Bacillota
>WENV183279619
OLSB01000627
157838
Bacillota
GTC
Asp
>WENV183279671
OLSB01000726
157838
Bacillota
GTC
Asp
>WENV183279838
OLSB01001126
157838
Bacillota
GTC
Asp
>WENV183280009
OLSB01001660
157838
Bacillota
GTC
Asp
>WENV183280070
OLSB01001973
292519
Bacillota
CAT
Met
>WENV183280035
OLSB01001826
144583
Bacillota
ACG
Arg
>WENV183281042
OLSB01028421
144672
Bacillota
TCT
Arg
>WENV183281415
OLSB01099903
247734
Bacillota
TGC
Ala
>WENV183281412
OLSB01098232
165918
Bacillota
GAT
Ile
>WENV183281452
OLSB01115509
419877
Bacillota
TCC
Gly
>WENV183279137
OLSB01000049
238974
Bacillota
GAA
Phe
>WENV183280181
OLSB01002502
144621
Bacillota
GTT
Asn
>WENV183280495
OLSB01005147
235113
Bacillota
GAA
Phe
>WENV183279322
OLSB01000171
243098
Bacillota
GGT
Thr
>WENV183280319
OLSB01003403
58712
Bacillota
CAG
Leu
>WENV183279566
OLSB01000523
245296
Bacillota
CCC
Gly
>WENV183279984
OLSB01001550
344240
Bacillota
GCC
Gly
>WENV183279875
OLSB01001206
196632
Bacillota
GTC
Asp
>WENV183279151
OLSB01000056
248965
Bacillota
GCC
Gly
>WENV183279649
OLSB01000666
248965
Bacillota
GCC
Gly
>WENV183280340
OLSB01003534
157635
Bacillota
TCT
Arg
>WENV183281248
OLSB01056472
299139
Bacillota
TGC
Ala
>WENV183280213
OLSB01002751
144594
Bacillota
CAC
Val
>WENV183279652
OLSB01000672
95563
Bacillota
GTA
Tyr
>WENV183279139
OLSB01000049
414486
Bacillota
CCC
Gly
>WENV183279595
OLSB01000584
272488
Bacillota
GAA
Phe
>WENV183280400
OLSB01004161
114075
Bacillota
TAG
Leu
>WENV183280671
OLSB01009055
384950
Bacillota
GCC
Gly
>WENV183280125
OLSB01002192
148144
Bacillota
CAT
Met
>WENV183280924
OLSB01019625
119513
Bacillota
CAA
Leu
>WENV183280123
OLSB01002192
238857
Bacillota
CCA
Trp
>WENV183279670
OLSB01000726
263523
Bacillota
TAC
Val
>WENV183279837
OLSB01001126
263523
Bacillota
TAC
Val
>WENV183280172
OLSB01002417
389329
Bacillota
TTC
Glu
>WENV183280102
OLSB01002095
338128
Bacillota
TTC
Glu
>WENV183280362
OLSB01003694
338128
Bacillota
TTC
Glu
>WENV183279876
OLSB01001206
245344
Bacillota
GAA
Phe
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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