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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
|
Download
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
86 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV183293420
OLSK01000438
339630
Bacillota
GCC
Gly
>WENV183294636
OLSK01045049
155958
Bacillota
GAT
Ile
>WENV183294503
OLSK01025609
158247
Bacillota
>WENV183293790
OLSK01001855
155113
Bacillota
CGG
Pro
>WENV183294165
OLSK01007330
144612
Bacillota
TCT
Arg
>WENV183293027
OLSK01000001
235134
Bacillota
GAA
Phe
>WENV183293939
OLSK01003056
235098
Bacillota
GAC
Val
>WENV183293778
OLSK01001794
98147
Bacillota
TAG
Leu
>WENV183294712
OLSK01064096
338152
Bacillota
TTC
Glu
>WENV183294318
OLSK01011911
44854
Bacillota
TGA
Ser
>WENV183294604
OLSK01038748
144577
Bacillota
GAT
Ile
>WENV183293324
OLSK01000248
37071
Bacillota
TGA
Ser
>WENV183294087
OLSK01005200
147691
Bacillota
GAT
Ile
>WENV183294232
OLSK01009045
411591
Bacillota
GGT
Thr
>WENV183293344
OLSK01000288
59312
Bacillota
CAG
Leu
>WENV183294055
OLSK01004885
59312
Bacillota
CAG
Leu
>WENV183294650
OLSK01046861
243346
Bacillota
TGC
Ala
>WENV183294359
OLSK01013946
245370
Bacillota
TGT
Thr
>WENV183293250
OLSK01000144
338147
Bacillota
CTC
Glu
>WENV183293911
OLSK01002781
338147
Bacillota
CTC
Glu
>WENV183294037
OLSK01004586
338147
Bacillota
CTC
Glu
>WENV183294721
OLSK01065562
235150
Bacillota
TGC
Ala
>WENV183294392
OLSK01015512
152297
Bacillota
CAT
Met
>WENV183294366
OLSK01014279
235091
Bacillota
CTT
Lys
>WENV183293424
OLSK01000440
148104
Bacillota
CAT
Met
>WENV183293343
OLSK01000288
44859
Bacillota
AAG
Leu
>WENV183293618
OLSK01001033
44859
Bacillota
AAG
Leu
>WENV183293665
OLSK01001280
11034
Bacillota
GGA
Ser
>WENV183294717
OLSK01064287
243646
Bacillota
GTT
Asn
>WENV183294579
OLSK01035587
235079
Bacillota
GAA
Phe
>WENV183294603
OLSK01038748
235087
Bacillota
TGC
Ala
>WENV183294715
OLSK01064096
149041
Bacillota
GTC
Asp
>WENV183294384
OLSK01015063
338149
Bacillota
CTC
Glu
>WENV183294409
OLSK01016356
245298
Bacillota
CGG
Pro
>WENV183294141
OLSK01006681
413152
Bacillota
TCC
Gly
>WENV183294513
OLSK01028000
413152
Bacillota
TCC
Gly
>WENV183293059
OLSK01000008
152149
Bacillota
GTG
His
>WENV183294719
OLSK01065410
152492
Bacillota
GGG
Pro
>WENV183294530
OLSK01029291
153911
Bacillota
GAT
Ile
>WENV183293028
OLSK01000001
240017
Bacillota
GCC
Gly
>WENV183294408
OLSK01016356
411547
Bacillota
CTG
Gln
>WENV183294380
OLSK01014766
147684
Bacillota
ACG
Arg
>WENV183294319
OLSK01011911
4624
Bacillota
GCT
Ser
>WENV183294681
OLSK01055295
412387
Bacillota
GCA
Cys
>WENV183294658
OLSK01050079
157193
Bacillota
GAT
Ile
>WENV183294056
OLSK01004893
235095
Bacillota
GGT
Thr
>WENV183294097
OLSK01005491
235095
Bacillota
GGT
Thr
>WENV183293617
OLSK01001028
411549
Bacillota
TTG
Gln
>WENV183293476
OLSK01000582
235142
Bacillota
CTT
Lys
>WENV183293585
OLSK01000887
235142
Bacillota
CTT
Lys
>WENV183294565
OLSK01034207
154711
Bacillota
TGG
Pro
>WENV183293198
OLSK01000086
338410
Bacillota
TTC
Glu
>WENV183293982
OLSK01003579
148188
Bacillota
CCG
Arg
>WENV183293951
OLSK01003219
96872
Bacillota
>WENV183293072
OLSK01000010
249522
Bacillota
TAC
Val
>WENV183293580
OLSK01000879
249522
Bacillota
TAC
Val
>WENV183294713
OLSK01064096
241432
Bacillota
TGT
Thr
>WENV183294457
OLSK01020669
235124
Bacillota
TGG
Pro
>WENV183293944
OLSK01003141
338129
Bacillota
TGT
Thr
>WENV183293052
OLSK01000006
157838
Bacillota
GTC
Asp
>WENV183294739
OLSK01070528
144583
Bacillota
ACG
Arg
>WENV183294736
OLSK01070118
247734
Bacillota
TGC
Ala
>WENV183294095
OLSK01005491
235171
Bacillota
CCA
Trp
>WENV183294385
OLSK01015063
144621
Bacillota
GTT
Asn
>WENV183293545
OLSK01000761
235113
Bacillota
GAA
Phe
>WENV183293656
OLSK01001221
148495
Bacillota
TCT
Arg
>WENV183293881
OLSK01002477
58712
Bacillota
CAG
Leu
>WENV183294486
OLSK01022608
58712
Bacillota
CAG
Leu
>WENV183294646
OLSK01046861
237681
Bacillota
GTC
Asp
>WENV183293731
OLSK01001586
245296
Bacillota
CCC
Gly
>WENV183294619
OLSK01042340
415519
Bacillota
GCA
Cys
>WENV183294267
OLSK01009778
344240
Bacillota
GCC
Gly
>WENV183293251
OLSK01000147
248965
Bacillota
GCC
Gly
>WENV183294142
OLSK01006698
248965
Bacillota
GCC
Gly
>WENV183293752
OLSK01001712
144594
Bacillota
CAC
Val
>WENV183293432
OLSK01000448
95563
Bacillota
GTA
Tyr
>WENV183293443
OLSK01000481
338127
Bacillota
TTG
Gln
>WENV183294566
OLSK01034207
148144
Bacillota
CAT
Met
>WENV183293490
OLSK01000627
238945
Bacillota
GCC
Gly
>WENV183294556
OLSK01032856
249259
Bacillota
GCC
Gly
>WENV183294523
OLSK01028668
238857
Bacillota
CCA
Trp
>WENV183293709
OLSK01001461
338128
Bacillota
TTC
Glu
>WENV183294131
OLSK01006454
338128
Bacillota
TTC
Glu
>WENV183294124
OLSK01006355
245344
Bacillota
GAA
Phe
>WENV183294396
OLSK01015664
237283
Bacillota
TTT
Lys
>WENV183294729
OLSK01068325
150669
Bacillota
GAT
Ile
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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