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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
80 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV183295018
OLSL01000155
235146
Actinomycetota
CGT
Thr
>WENV183295166
OLSL01000395
119475
Actinomycetota
TAA
Leu
>WENV183295415
OLSL01001021
235347
Actinomycetota
GGC
Ala
>WENV183294958
OLSL01000089
166493
Actinomycetota
CTT
Lys
>WENV183295462
OLSL01001261
235153
Actinomycetota
CCT
Arg
>WENV183294989
OLSL01000126
144589
Actinomycetota
ACG
Arg
>WENV183295834
OLSL01004312
37070
Actinomycetota
CGA
Ser
>WENV183295365
OLSL01000833
235092
Actinomycetota
CCG
Arg
>WENV183296000
OLSL01007878
261773
Actinomycetota
CCT
Arg
>WENV183296081
OLSL01010661
235194
Actinomycetota
GTG
His
>WENV183295636
OLSL01002315
158720
Actinomycetota
ACG
Arg
>WENV183295947
OLSL01006623
245301
Actinomycetota
GCC
Gly
>WENV183295948
OLSL01006623
245301
Actinomycetota
GCC
Gly
>WENV183295383
OLSL01000886
411601
Actinomycetota
CCC
Gly
>WENV183294860
OLSL01000016
144826
Actinomycetota
GGG
Pro
>WENV183295632
OLSL01002292
23370
Actinomycetota
GCT
Ser
>WENV183294827
OLSL01000008
338239
Actinomycetota
TTC
Glu
>WENV183294969
OLSL01000104
162208
Actinomycetota
TAC
Val
>WENV183295043
OLSL01000176
16219
Actinomycetota
GCT
Ser
>WENV183295836
OLSL01004331
235174
Actinomycetota
TGC
Ala
>WENV183294838
OLSL01000009
235101
Actinomycetota
TTT
Lys
>WENV183295306
OLSL01000676
235101
Actinomycetota
TTT
Lys
>WENV183294916
OLSL01000055
121510
Actinomycetota
TAA
Leu
>WENV183294975
OLSL01000114
144625
Actinomycetota
GTC
Asp
>WENV183296492
OLSL01075042
154640
Actinomycetota
CTT
Lys
>WENV183296087
OLSL01010777
153948
Actinomycetota
GGG
Pro
>WENV183294829
OLSL01000008
44855
Actinomycetota
TGA
Ser
>WENV183295972
OLSL01007110
37212
Actinomycetota
GAG
Leu
>WENV183295019
OLSL01000155
235199
Actinomycetota
CAC
Val
>WENV183295697
OLSL01002778
44862
Actinomycetota
CGA
Ser
>WENV183295414
OLSL01001021
413665
Actinomycetota
TTG
Gln
>WENV183296364
OLSL01037908
235849
Actinomycetota
CCT
Arg
>WENV183295649
OLSL01002408
254857
Actinomycetota
CCG
Arg
>WENV183294987
OLSL01000121
16223
Actinomycetota
GAG
Leu
>WENV183294976
OLSL01000114
144593
Actinomycetota
TAT
Ile
>WENV183295631
OLSL01002292
144700
Actinomycetota
CAT
Met
>WENV183294846
OLSL01000013
238473
Actinomycetota
GTG
His
>WENV183295755
OLSL01003230
144636
Actinomycetota
GAT
Ile
>WENV183294834
OLSL01000009
243671
Actinomycetota
CTC
Glu
>WENV183294912
OLSL01000052
243671
Actinomycetota
CTC
Glu
>WENV183295041
OLSL01000176
98279
Actinomycetota
GTA
Tyr
>WENV183294835
OLSL01000009
338148
Actinomycetota
CTG
Gln
>WENV183294844
OLSL01000013
235148
Actinomycetota
GTT
Asn
>WENV183294845
OLSL01000013
235148
Actinomycetota
GTT
Asn
>WENV183294832
OLSL01000008
144825
Actinomycetota
CAT
Met
>WENV183295059
OLSL01000210
338139
Actinomycetota
GTT
Asn
>WENV183294833
OLSL01000008
235348
Actinomycetota
CCT
Arg
>WENV183294904
OLSL01000051
37521
Actinomycetota
GCT
Ser
>WENV183294796
OLSL01000001
144907
Actinomycetota
GGG
Pro
>WENV183294934
OLSL01000072
411554
Actinomycetota
CCC
Gly
>WENV183294837
OLSL01000009
113601
Actinomycetota
TAG
Leu
>WENV183295017
OLSL01000155
113601
Actinomycetota
TAG
Leu
>WENV183294917
OLSL01000055
144595
Actinomycetota
CAA
Leu
>WENV183295031
OLSL01000166
144595
Actinomycetota
CAA
Leu
>WENV183294849
OLSL01000013
145343
Actinomycetota
GGG
Pro
>WENV183295288
OLSL01000642
235149
Actinomycetota
CCT
Arg
>WENV183295385
OLSL01000888
414234
Actinomycetota
CTG
Gln
>WENV183294918
OLSL01000055
163764
Actinomycetota
TGG
Pro
>WENV183294836
OLSL01000009
235121
Actinomycetota
CGT
Thr
>WENV183295016
OLSL01000155
235121
Actinomycetota
CGT
Thr
>WENV183295305
OLSL01000676
47164
Actinomycetota
GGA
Ser
>WENV183295032
OLSL01000166
144635
Actinomycetota
TGG
Pro
>WENV183295183
OLSL01000433
61501
Actinomycetota
CAG
Leu
>WENV183295909
OLSL01005576
61501
Actinomycetota
CAG
Leu
>WENV183294990
OLSL01000128
17009
Actinomycetota
GAG
Leu
>WENV183294933
OLSL01000072
80622
Actinomycetota
CAG
Leu
>WENV183295382
OLSL01000886
80622
Actinomycetota
CAG
Leu
>WENV183295907
OLSL01005451
44851
Actinomycetota
TGA
Ser
>WENV183296074
OLSL01010363
7409
Actinomycetota
CGA
Ser
>WENV183296197
OLSL01016858
7409
Actinomycetota
CGA
Ser
>WENV183294913
OLSL01000052
356597
Actinomycetota
CTG
Gln
>WENV183295125
OLSL01000326
158513
Actinomycetota
TGG
Pro
>WENV183294802
OLSL01000001
412834
Actinomycetota
GCA
Cys
>WENV183295167
OLSL01000405
235173
Actinomycetota
GGC
Ala
>WENV183295112
OLSL01000294
243162
Actinomycetota
GTT
Asn
>WENV183295878
OLSL01004927
243162
Actinomycetota
GTT
Asn
>WENV183295100
OLSL01000257
144660
Actinomycetota
TAC
Val
>WENV183294905
OLSL01000051
411599
Actinomycetota
TTG
Gln
>WENV183295934
OLSL01006305
95593
Actinomycetota
>WENV183295598
OLSL01002030
144823
Actinomycetota
TCT
Arg
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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