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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
84 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV183718686
PDWJ01005889
378157
Bacillota
TTC
Glu
>WENV183719321
PDWJ01012328
378157
Bacillota
TTC
Glu
>WENV183718287
PDWJ01003204
390153
Bacillota
GCC
Gly
>WENV183718689
PDWJ01005889
390153
Bacillota
GCC
Gly
>WENV183716747
PDWJ01000162
158247
Bacillota
>WENV183722273
PDWJ01115883
16430
Bacillota
GCT
Ser
>WENV183719277
PDWJ01011583
359540
Bacillota
GTT
Asn
>WENV183720501
PDWJ01035852
359540
Bacillota
GTT
Asn
>WENV183722056
PDWJ01102504
429443
Bacillota
GCA
Cys
>WENV183722149
PDWJ01108233
114359
Bacillota
TAG
Leu
>WENV183721917
PDWJ01094580
37083
Bacillota
TGA
Ser
>WENV183719803
PDWJ01020617
144668
Bacillota
GTC
Asp
>WENV183721433
PDWJ01069086
156937
Bacillota
GTG
His
>WENV183719149
PDWJ01010153
173314
Bacillota
GAT
Ile
>WENV183720366
PDWJ01032474
173314
Bacillota
GAT
Ile
>WENV183717474
PDWJ01000965
338531
Bacillota
GCC
Gly
>WENV183717632
PDWJ01001256
338531
Bacillota
GCC
Gly
>WENV183717836
PDWJ01001725
338531
Bacillota
GCC
Gly
>WENV183717889
PDWJ01001878
338531
Bacillota
GCC
Gly
>WENV183719240
PDWJ01010992
338531
Bacillota
GCC
Gly
>WENV183719427
PDWJ01014008
338531
Bacillota
GCC
Gly
>WENV183720947
PDWJ01050270
338531
Bacillota
GCC
Gly
>WENV183721512
PDWJ01073250
338531
Bacillota
GCC
Gly
>WENV183722077
PDWJ01104429
338531
Bacillota
GCC
Gly
>WENV183722471
PDWJ01131654
338531
Bacillota
GCC
Gly
>WENV183720607
PDWJ01039205
155089
Bacillota
CAT
Met
>WENV183717921
PDWJ01001980
339717
Bacillota
TTC
Glu
>WENV183719804
PDWJ01020617
312468
Bacillota
TAC
Val
>WENV183722081
PDWJ01104638
312468
Bacillota
TAC
Val
>WENV183721522
PDWJ01073624
313104
Bacillota
TAC
Val
>WENV183721717
PDWJ01082070
300148
Bacillota
TAC
Val
>WENV183720641
PDWJ01040376
185292
Bacillota
ACG
Arg
>WENV183722268
PDWJ01115883
253195
Bacillota
TTT
Lys
>WENV183718803
PDWJ01006630
37307
Bacillota
TGA
Ser
>WENV183719222
PDWJ01010849
37307
Bacillota
TGA
Ser
>WENV183720088
PDWJ01026180
37307
Bacillota
TGA
Ser
>WENV183722200
PDWJ01111335
154711
Bacillota
TGG
Pro
>WENV183717550
PDWJ01001108
429518
Bacillota
TCC
Gly
>WENV183718305
PDWJ01003304
429518
Bacillota
TCC
Gly
>WENV183718800
PDWJ01006630
429518
Bacillota
TCC
Gly
>WENV183718885
PDWJ01007430
429518
Bacillota
TCC
Gly
>WENV183718964
PDWJ01008161
429518
Bacillota
TCC
Gly
>WENV183719123
PDWJ01009919
429518
Bacillota
TCC
Gly
>WENV183719751
PDWJ01019758
429518
Bacillota
TCC
Gly
>WENV183720679
PDWJ01041383
429518
Bacillota
TCC
Gly
>WENV183721612
PDWJ01077373
429518
Bacillota
TCC
Gly
>WENV183717509
PDWJ01001031
388132
Bacillota
TTC
Glu
>WENV183718699
PDWJ01005943
388132
Bacillota
TTC
Glu
>WENV183719217
PDWJ01010849
388132
Bacillota
TTC
Glu
>WENV183721521
PDWJ01073624
388132
Bacillota
TTC
Glu
>WENV183718076
PDWJ01002303
235291
Bacillota
TTT
Lys
>WENV183718120
PDWJ01002474
235291
Bacillota
TTT
Lys
>WENV183718309
PDWJ01003304
235291
Bacillota
TTT
Lys
>WENV183718726
PDWJ01006122
235291
Bacillota
TTT
Lys
>WENV183718802
PDWJ01006630
235291
Bacillota
TTT
Lys
>WENV183718889
PDWJ01007430
235291
Bacillota
TTT
Lys
>WENV183718965
PDWJ01008161
235291
Bacillota
TTT
Lys
>WENV183719428
PDWJ01014008
235291
Bacillota
TTT
Lys
>WENV183720404
PDWJ01033582
235291
Bacillota
TTT
Lys
>WENV183720948
PDWJ01050270
235291
Bacillota
TTT
Lys
>WENV183721019
PDWJ01052485
235291
Bacillota
TTT
Lys
>WENV183721513
PDWJ01073250
235291
Bacillota
TTT
Lys
>WENV183721413
PDWJ01068122
341971
Bacillota
GCC
Gly
>WENV183720387
PDWJ01033227
194064
Bacillota
GAT
Ile
>WENV183720971
PDWJ01050979
287296
Bacillota
TTT
Lys
>WENV183717549
PDWJ01001108
190106
Bacillota
TGG
Pro
>WENV183718304
PDWJ01003304
190106
Bacillota
TGG
Pro
>WENV183718478
PDWJ01004333
190106
Bacillota
TGG
Pro
>WENV183718736
PDWJ01006251
190106
Bacillota
TGG
Pro
>WENV183718884
PDWJ01007430
190106
Bacillota
TGG
Pro
>WENV183719112
PDWJ01009838
190106
Bacillota
TGG
Pro
>WENV183719122
PDWJ01009919
190106
Bacillota
TGG
Pro
>WENV183719534
PDWJ01015767
190106
Bacillota
TGG
Pro
>WENV183719750
PDWJ01019758
190106
Bacillota
TGG
Pro
>WENV183720029
PDWJ01025128
190106
Bacillota
TGG
Pro
>WENV183720678
PDWJ01041383
190106
Bacillota
TGG
Pro
>WENV183721332
PDWJ01064899
190106
Bacillota
TGG
Pro
>WENV183721361
PDWJ01065739
190106
Bacillota
TGG
Pro
>WENV183722207
PDWJ01111835
190106
Bacillota
TGG
Pro
>WENV183722265
PDWJ01115883
190106
Bacillota
TGG
Pro
>WENV183721619
PDWJ01077373
148144
Bacillota
CAT
Met
>WENV183721372
PDWJ01066168
292012
Bacillota
TGC
Ala
>WENV183722448
PDWJ01130082
292012
Bacillota
TGC
Ala
>WENV183721611
PDWJ01077373
96671
Bacillota
GTA
Tyr
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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