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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
47 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV183738549
PJUE01000017
411593
Gammaproteobacteria
CCC
Gly
>WENV183738975
PJUE01000703
411593
Gammaproteobacteria
CCC
Gly
>WENV183738882
PJUE01000349
23711
Gammaproteobacteria
GGA
Ser
>WENV183738779
PJUE01000188
7214
Gammaproteobacteria
GCT
Ser
>WENV183739499
PJUE01024484
412119
Gammaproteobacteria
CTG
Gln
>WENV183738684
PJUE01000096
33542
Gammaproteobacteria
TGA
Ser
>WENV183738897
PJUE01000377
33542
Gammaproteobacteria
TGA
Ser
>WENV183739279
PJUE01005848
6885
Gammaproteobacteria
GCT
Ser
>WENV183738864
PJUE01000325
412505
Gammaproteobacteria
GCA
Cys
>WENV183738627
PJUE01000049
238674
Gammaproteobacteria
TGT
Thr
>WENV183738984
PJUE01000735
238674
Gammaproteobacteria
TGT
Thr
>WENV183738758
PJUE01000168
51143
Gammaproteobacteria
TGA
Ser
>WENV183738796
PJUE01000207
411594
Gammaproteobacteria
TCC
Gly
>WENV183739250
PJUE01004725
16446
Gammaproteobacteria
GCT
Ser
>WENV183739670
PJUE01054114
16446
Gammaproteobacteria
GCT
Ser
>WENV183739672
PJUE01054115
16446
Gammaproteobacteria
GCT
Ser
>WENV183738920
PJUE01000443
279806
Gammaproteobacteria
TGT
Thr
>WENV183739374
PJUE01011520
279806
Gammaproteobacteria
TGT
Thr
>WENV183739150
PJUE01002374
52727
Gammaproteobacteria
GGA
Ser
>WENV183739334
PJUE01008515
52727
Gammaproteobacteria
GGA
Ser
>WENV183739406
PJUE01014336
52727
Gammaproteobacteria
GGA
Ser
>WENV183739502
PJUE01024832
315638
Gammaproteobacteria
TAC
Val
>WENV183739538
PJUE01029438
315638
Gammaproteobacteria
TAC
Val
>WENV183738778
PJUE01000188
412442
Gammaproteobacteria
GCA
Cys
>WENV183738919
PJUE01000443
238307
Gammaproteobacteria
GAA
Phe
>WENV183738683
PJUE01000095
96066
Gammaproteobacteria
TAA
Leu
>WENV183739419
PJUE01014894
96066
Gammaproteobacteria
TAA
Leu
>WENV183738947
PJUE01000561
161470
Gammaproteobacteria
TCT
Arg
>WENV183739053
PJUE01001288
161470
Gammaproteobacteria
TCT
Arg
>WENV183739582
PJUE01035323
68265
Gammaproteobacteria
GAG
Leu
>WENV183739081
PJUE01001457
173286
Gammaproteobacteria
GGG
Pro
>WENV183739097
PJUE01001615
173286
Gammaproteobacteria
GGG
Pro
>WENV183738874
PJUE01000331
347438
Gammaproteobacteria
CTG
Gln
>WENV183738875
PJUE01000331
347438
Gammaproteobacteria
CTG
Gln
>WENV183738788
PJUE01000195
165964
Gammaproteobacteria
ACG
Arg
>WENV183738789
PJUE01000195
165964
Gammaproteobacteria
ACG
Arg
>WENV183738790
PJUE01000195
165964
Gammaproteobacteria
ACG
Arg
>WENV183738791
PJUE01000195
165964
Gammaproteobacteria
ACG
Arg
>WENV183739623
PJUE01043795
165964
Gammaproteobacteria
ACG
Arg
>WENV183739671
PJUE01054114
165964
Gammaproteobacteria
ACG
Arg
>WENV183739673
PJUE01054115
165964
Gammaproteobacteria
ACG
Arg
>WENV183738792
PJUE01000195
147595
Gammaproteobacteria
CCT
Arg
>WENV183739383
PJUE01012119
147595
Gammaproteobacteria
CCT
Arg
>WENV183738741
PJUE01000140
16238
Gammaproteobacteria
CGA
Ser
>WENV183739079
PJUE01001440
16238
Gammaproteobacteria
CGA
Ser
>WENV183738806
PJUE01000221
145334
Gammaproteobacteria
CCG
Arg
>WENV183738606
PJUE01000039
96065
Gammaproteobacteria
TAG
Leu
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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