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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
10 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV183743188
PJUJ01000122
340609
Actinomycetota
GCC
Gly
>WENV183743123
PJUJ01000045
347986
Actinomycetota
CAC
Val
>WENV183743182
PJUJ01000107
243493
Actinomycetota
CCT
Arg
>WENV183743078
PJUJ01000026
251199
Actinomycetota
TTT
Lys
>WENV183743191
PJUJ01000123
162442
Actinomycetota
GAT
Ile
>WENV183743029
PJUJ01000010
412879
Actinomycetota
TCC
Gly
>WENV183742985
PJUJ01000004
269853
Actinomycetota
CTC
Glu
>WENV183742984
PJUJ01000004
338297
Actinomycetota
CTG
Gln
>WENV183743125
PJUJ01000045
193267
Actinomycetota
CAA
Leu
>WENV183743077
PJUJ01000024
82645
Actinomycetota
GAG
Leu
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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