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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
17 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>SRA1003004
SRR002326.147258
254169
Bacteroidota
TCC
Gly
>SRA1002786
SRR002326.15083
256428
Bacteroidota
GAA
Phe
>SRA1003011
SRR002326.151476
18498
Bacteroidota
GCT
Ser
>SRA1003094
SRR002326.193190
148126
Bacteroidota
CGG
Pro
>SRA1003116
SRR002326.210811
145555
Bacteroidota
GTC
Asp
>SRA1003195
SRR002326.294659
166688
Bacteroidota
GTC
Asp
>SRA1003308
SRR002326.380502
235818
Bacteroidota
TTT
Lys
>SRA1003309
SRR002326.381338
47030
Bacteroidota
TAA
Leu
>SRA1003310
SRR002326.382100
113741
Bacteroidota
GTA
Tyr
>SRA1003389
SRR002326.431513
348279
Bacteroidota
CAT
Met
>SRA1003437
SRR002326.464531
338509
Bacteroidota
TTC
Glu
>SRA1002836
SRR002326.47755
151405
Bacteroidota
TGC
Ala
>SRA1003484
SRR002326.494663
18498
Bacteroidota
GCT
Ser
>SRA1002882
SRR002326.72313
127464
Bacteroidota
TAC
Val
>SRA1002884
SRR002326.73469
150543
Bacteroidota
GAT
Ile
>SRA1002886
SRR002326.74406
113741
Bacteroidota
GTA
Tyr
>SRA1002894
SRR002326.80786
148127
Bacteroidota
GTG
His
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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