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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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Download
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
10 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>SRA1015559
SRR023846.111361
308813
Betaproteobacteria
TAC
Val
>SRA1015670
SRR023846.152101
145694
Betaproteobacteria
ACG
Arg
>SRA1015689
SRR023846.158871
25577
Betaproteobacteria
TGA
Ser
>SRA1015975
SRR023846.291949
146896
Betaproteobacteria
TTG
Gln
>SRA1015363
SRR023846.30547
412167
Betaproteobacteria
GCA
Cys
>SRA1016032
SRR023846.317459
95934
Betaproteobacteria
GAG
Leu
>SRA1016088
SRR023846.342990
95951
Betaproteobacteria
CAA
Leu
>SRA1016108
SRR023846.350915
25577
Betaproteobacteria
TGA
Ser
>SRA1016148
SRR023846.369740
239140
Betaproteobacteria
TTT
Lys
>SRA1016495
SRR023846.530639
95934
Betaproteobacteria
GAG
Leu
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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