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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
24 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>SRA1019570
SRR035082.477647
146381
Chlorobiota
CAT
Met
>SRA1017489
SRR035082.148445
80756
Chlorobiota
GTA
Tyr
>SRA1019126
SRR035082.406202
80756
Chlorobiota
GTA
Tyr
>SRA1017657
SRR035082.176058
319359
Chlorobiota
CGC
Ala
>SRA1017835
SRR035082.204388
146232
Chlorobiota
GGG
Pro
>SRA1016908
SRR035082.50899
236741
Chlorobiota
CCG
Arg
>SRA1019571
SRR035082.477647
236933
Chlorobiota
CCC
Gly
>SRA1016909
SRR035082.50899
237026
Chlorobiota
CGG
Pro
>SRA1016888
SRR035082.47881
237026
Chlorobiota
CGG
Pro
>SRA1018808
SRR035082.350828
95795
Chlorobiota
CAG
Leu
>SRA1018640
SRR035082.326561
95795
Chlorobiota
CAG
Leu
>SRA1018516
SRR035082.303563
95795
Chlorobiota
CAG
Leu
>SRA1017711
SRR035082.184109
95795
Chlorobiota
CAG
Leu
>SRA1019523
SRR035082.470721
339069
Chlorobiota
TTG
Gln
>SRA1019111
SRR035082.403679
339069
Chlorobiota
TTG
Gln
>SRA1017483
SRR035082.147521
339069
Chlorobiota
TTG
Gln
>SRA1016966
SRR035082.61612
95811
Chlorobiota
GAG
Leu
>SRA1016883
SRR035082.47164
146165
Chlorobiota
GTG
His
>SRA1018200
SRR035082.254988
146165
Chlorobiota
GTG
His
>SRA1017894
SRR035082.211203
236663
Chlorobiota
CCA
Trp
>SRA1018642
SRR035082.326690
146283
Chlorobiota
TAC
Val
>SRA1018428
SRR035082.290217
235782
Chlorobiota
CAT
Met
>SRA1019518
SRR035082.470182
236974
Chlorobiota
TGC
Ala
>SRA1019140
SRR035082.408994
236974
Chlorobiota
TGC
Ala
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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