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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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Download
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
18 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV170002987
AGTN01185745
480996
Bacteroidota
CCA
Trp
>WENV170003831
AGTN01465688
282712
Bacteroidota
TTT
Lys
>WENV170004626
AGTN01741215
156756
Bacteroidota
TGG
Pro
>WENV170002483
AGTN01045659
352207
Bacteroidota
TCC
Gly
>WENV170004112
AGTN01564497
182267
Bacteroidota
GTT
Asn
>WENV170004113
AGTN01564497
182267
Bacteroidota
GTT
Asn
>WENV170003317
AGTN01295560
336000
Bacteroidota
CAT
Met
>WENV170003712
AGTN01423589
168732
Bacteroidota
TGG
Pro
>WENV170002432
AGTN01028479
20766
Bacteroidota
GGA
Ser
>WENV170002504
AGTN01052447
73011
Bacteroidota
CAA
Leu
>WENV170002644
AGTN01091393
280515
Bacteroidota
CCA
Trp
>WENV170003537
AGTN01369743
118464
Bacteroidota
TAG
Leu
>WENV170004440
AGTN01678152
118464
Bacteroidota
TAG
Leu
>WENV170002958
AGTN01179745
188555
Bacteroidota
CAT
Met
>WENV170004149
AGTN01577971
416636
Bacteroidota
TTC
Glu
>WENV170003139
AGTN01236657
147822
Bacteroidota
CAA
Leu
>WENV170004319
AGTN01636456
147822
Bacteroidota
CAA
Leu
>WENV170004491
AGTN01698676
147822
Bacteroidota
CAA
Leu
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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