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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
|
Download
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
65 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV082242
BAAV01000897
280870
Bacillota
TGC
Ala
>WENV082344
BAAV01004090
356775
Bacillota
TGT
Thr
>WENV082332
BAAV01003447
349107
Bacillota
GCC
Gly
>WENV082445
BAAV01011088
349107
Bacillota
GCC
Gly
>WENV082520
BAAV01015145
349107
Bacillota
GCC
Gly
>WENV082446
BAAV01011088
405363
Bacillota
GCA
Cys
>WENV082293
BAAV01001993
289472
Bacillota
TTC
Glu
>WENV082519
BAAV01015145
280428
Bacillota
GAA
Phe
>WENV082211
BAAV01000442
280428
Bacillota
GAA
Phe
>WENV082329
BAAV01003348
184114
Bacillota
GTG
His
>WENV082310
BAAV01002759
231532
Bacillota
ACG
Arg
>WENV082686
BAAV01032787
175842
Bacillota
CAC
Val
>WENV082269
BAAV01001391
295166
Bacillota
TGC
Ala
>WENV082283
BAAV01001815
295166
Bacillota
TGC
Ala
>WENV082320
BAAV01003058
190476
Bacillota
CAT
Met
>WENV082322
BAAV01003098
184522
Bacillota
CCT
Arg
>WENV082592
BAAV01023053
280447
Bacillota
GAC
Val
>WENV082374
BAAV01005123
47207
Bacillota
TGA
Ser
>WENV082292
BAAV01001993
359682
Bacillota
TAC
Val
>WENV082565
BAAV01018138
175825
Bacillota
GAT
Ile
>WENV082462
BAAV01011386
175825
Bacillota
GAT
Ile
>WENV082218
BAAV01000571
175825
Bacillota
GAT
Ile
>WENV082197
BAAV01000221
175825
Bacillota
GAT
Ile
>WENV082213
BAAV01000442
280427
Bacillota
TAC
Val
>WENV082690
BAAV01033287
481217
Bacillota
GCA
Cys
>WENV082553
BAAV01017548
481217
Bacillota
GCA
Cys
>WENV082558
BAAV01017999
187458
Bacillota
CAT
Met
>WENV082379
BAAV01005517
175859
Bacillota
TCT
Arg
>WENV082219
BAAV01000571
280436
Bacillota
TGC
Ala
>WENV082560
BAAV01017999
356355
Bacillota
CAT
Met
>WENV082275
BAAV01001600
175831
Bacillota
ACG
Arg
>WENV082630
BAAV01028453
284627
Bacillota
GAA
Phe
>WENV082279
BAAV01001709
289147
Bacillota
GTT
Asn
>WENV082291
BAAV01001961
289475
Bacillota
GTG
His
>WENV082666
BAAV01030934
183957
Bacillota
CCT
Arg
>WENV082501
BAAV01014167
239104
Bacillota
GAT
Ile
>WENV082376
BAAV01005300
20913
Bacillota
GCT
Ser
>WENV082636
BAAV01028637
27216
Bacillota
GCT
Ser
>WENV082254
BAAV01000939
287380
Bacillota
CTT
Lys
>WENV082625
BAAV01028036
398854
Bacillota
CTC
Glu
>WENV082287
BAAV01001880
398854
Bacillota
CTC
Glu
>WENV082693
BAAV01033910
480324
Bacillota
TTG
Gln
>WENV082305
BAAV01002358
303718
Bacillota
TGT
Thr
>WENV082706
BAAV01035395
292374
Bacillota
TGC
Ala
>WENV082295
BAAV01001993
403952
Bacillota
CTG
Gln
>WENV082441
BAAV01010401
398857
Bacillota
TTC
Glu
>WENV082460
BAAV01011331
280444
Bacillota
GGT
Thr
>WENV082429
BAAV01009598
280444
Bacillota
GGT
Thr
>WENV082297
BAAV01002148
280444
Bacillota
GGT
Thr
>WENV082294
BAAV01001993
289745
Bacillota
TTT
Lys
>WENV082251
BAAV01000939
284742
Bacillota
GAA
Phe
>WENV082321
BAAV01003058
398832
Bacillota
TTC
Glu
>WENV082488
BAAV01012605
398832
Bacillota
TTC
Glu
>WENV082331
BAAV01003406
398852
Bacillota
CTC
Glu
>WENV082705
BAAV01035395
201856
Bacillota
GAT
Ile
>WENV082272
BAAV01001506
184523
Bacillota
GAC
Val
>WENV082273
BAAV01001506
184523
Bacillota
GAC
Val
>WENV082247
BAAV01000939
100945
Bacillota
CAG
Leu
>WENV082538
BAAV01016182
100945
Bacillota
CAG
Leu
>WENV082290
BAAV01001961
403766
Bacillota
TTG
Gln
>WENV082518
BAAV01015145
175849
Bacillota
GTC
Asp
>WENV082459
BAAV01011331
175849
Bacillota
GTC
Asp
>WENV082430
BAAV01009598
175849
Bacillota
GTC
Asp
>WENV082637
BAAV01028655
280486
Bacillota
TGC
Ala
>WENV082551
BAAV01017258
482078
Bacillota
CCC
Gly
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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