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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
116 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV083120
BAAX01002873
99852
Bacillota
GTA
Tyr
>WENV083298
BAAX01012334
99852
Bacillota
GTA
Tyr
>WENV083278
BAAX01010820
404076
Bacillota
GCC
Gly
>WENV083171
BAAX01005195
289121
Bacillota
CCA
Trp
>WENV083077
BAAX01001651
289472
Bacillota
TTC
Glu
>WENV083274
BAAX01010820
289472
Bacillota
TTC
Glu
>WENV083207
BAAX01006298
280428
Bacillota
GAA
Phe
>WENV083346
BAAX01015668
280428
Bacillota
GAA
Phe
>WENV083369
BAAX01016542
280428
Bacillota
GAA
Phe
>WENV083460
BAAX01025185
280428
Bacillota
GAA
Phe
>WENV083172
BAAX01005195
287508
Bacillota
GTG
His
>WENV083458
BAAX01025185
280466
Bacillota
TAC
Val
>WENV083433
BAAX01023296
280466
Bacillota
TAC
Val
>WENV083371
BAAX01016542
280466
Bacillota
TAC
Val
>WENV083344
BAAX01015668
280466
Bacillota
TAC
Val
>WENV083209
BAAX01006298
280466
Bacillota
TAC
Val
>WENV083405
BAAX01020306
179563
Bacillota
GAT
Ile
>WENV083178
BAAX01005544
289474
Bacillota
CCA
Trp
>WENV083034
BAAX01000553
101000
Bacillota
GTA
Tyr
>WENV083406
BAAX01020306
295166
Bacillota
TGC
Ala
>WENV083107
BAAX01002563
295166
Bacillota
TGC
Ala
>WENV083005
BAAX01000170
295166
Bacillota
TGC
Ala
>WENV083092
BAAX01002192
190476
Bacillota
CAT
Met
>WENV083168
BAAX01005012
190476
Bacillota
CAT
Met
>WENV083420
BAAX01022175
190476
Bacillota
CAT
Met
>WENV083500
BAAX01029119
284506
Bacillota
CCA
Trp
>WENV083130
BAAX01003138
5692
Bacillota
GCT
Ser
>WENV083119
BAAX01002783
5692
Bacillota
GCT
Ser
>WENV083070
BAAX01001334
47207
Bacillota
TGA
Ser
>WENV083323
BAAX01014130
186123
Bacillota
GTC
Asp
>WENV083430
BAAX01023277
175825
Bacillota
GAT
Ile
>WENV083056
BAAX01000905
175825
Bacillota
GAT
Ile
>WENV083004
BAAX01000131
175825
Bacillota
GAT
Ile
>WENV083528
BAAX01032220
100696
Bacillota
GTA
Tyr
>WENV083265
BAAX01009901
73009
Bacillota
CAG
Leu
>WENV083103
BAAX01002561
73009
Bacillota
CAG
Leu
>WENV083250
BAAX01008340
481217
Bacillota
GCA
Cys
>WENV083527
BAAX01032220
187458
Bacillota
CAT
Met
>WENV083201
BAAX01006226
291581
Bacillota
CGG
Pro
>WENV083105
BAAX01002561
175859
Bacillota
TCT
Arg
>WENV083516
BAAX01030544
398835
Bacillota
GCC
Gly
>WENV083431
BAAX01023277
280436
Bacillota
TGC
Ala
>WENV083003
BAAX01000131
280436
Bacillota
TGC
Ala
>WENV083055
BAAX01000905
280436
Bacillota
TGC
Ala
>WENV083288
BAAX01011531
175831
Bacillota
ACG
Arg
>WENV083101
BAAX01002539
175831
Bacillota
ACG
Arg
>WENV083031
BAAX01000492
175831
Bacillota
ACG
Arg
>WENV083277
BAAX01010820
289147
Bacillota
GTT
Asn
>WENV083078
BAAX01001651
289147
Bacillota
GTT
Asn
>WENV083100
BAAX01002436
289475
Bacillota
GTG
His
>WENV083324
BAAX01014130
291634
Bacillota
GAA
Phe
>WENV083513
BAAX01030330
20913
Bacillota
GCT
Ser
>WENV083258
BAAX01009142
480322
Bacillota
CTG
Gln
>WENV083200
BAAX01006226
480322
Bacillota
CTG
Gln
>WENV083427
BAAX01022664
184455
Bacillota
GTC
Asp
>WENV083085
BAAX01001881
184455
Bacillota
GTC
Asp
>WENV083082
BAAX01001769
287380
Bacillota
CTT
Lys
>WENV083081
BAAX01001769
287380
Bacillota
CTT
Lys
>WENV082987
BAAX01000029
287380
Bacillota
CTT
Lys
>WENV083019
BAAX01000383
48832
Bacillota
TAA
Leu
>WENV083477
BAAX01027515
398854
Bacillota
CTC
Glu
>WENV082993
BAAX01000032
398854
Bacillota
CTC
Glu
>WENV083272
BAAX01010602
291576
Bacillota
CCC
Gly
>WENV083473
BAAX01027113
480324
Bacillota
TTG
Gln
>WENV083273
BAAX01010820
292612
Bacillota
TAC
Val
>WENV083378
BAAX01016859
56079
Bacillota
AAG
Leu
>WENV083276
BAAX01010820
403952
Bacillota
CTG
Gln
>WENV083028
BAAX01000447
404126
Bacillota
GCC
Gly
>WENV083026
BAAX01000447
404126
Bacillota
GCC
Gly
>WENV083017
BAAX01000383
404126
Bacillota
GCC
Gly
>WENV083145
BAAX01003686
186051
Bacillota
GAT
Ile
>WENV083313
BAAX01013803
117745
Bacillota
GTA
Tyr
>WENV083425
BAAX01022454
280444
Bacillota
GGT
Thr
>WENV083225
BAAX01007813
280444
Bacillota
GGT
Thr
>WENV083174
BAAX01005487
280444
Bacillota
GGT
Thr
>WENV083132
BAAX01003305
280444
Bacillota
GGT
Thr
>WENV083086
BAAX01001883
280444
Bacillota
GGT
Thr
>WENV083261
BAAX01009694
104114
Bacillota
CAG
Leu
>WENV083426
BAAX01022664
100999
Bacillota
GAG
Leu
>WENV083275
BAAX01010820
289745
Bacillota
TTT
Lys
>WENV083541
BAAX01035151
179755
Bacillota
CCG
Arg
>WENV083264
BAAX01009837
179755
Bacillota
CCG
Arg
>WENV083000
BAAX01000062
289154
Bacillota
CTT
Lys
>WENV082984
BAAX01000029
284742
Bacillota
GAA
Phe
>WENV083421
BAAX01022175
398832
Bacillota
TTC
Glu
>WENV083167
BAAX01005012
398832
Bacillota
TTC
Glu
>WENV083091
BAAX01002192
398832
Bacillota
TTC
Glu
>WENV083379
BAAX01016860
118669
Bacillota
GTA
Tyr
>WENV083109
BAAX01002581
175915
Bacillota
GTC
Asp
>WENV083311
BAAX01013803
280462
Bacillota
GAA
Phe
>WENV083347
BAAX01015784
398852
Bacillota
CTC
Glu
>WENV083164
BAAX01004600
201856
Bacillota
GAT
Ile
>WENV083486
BAAX01028002
289123
Bacillota
GGT
Thr
>WENV083094
BAAX01002405
289123
Bacillota
GGT
Thr
>WENV083152
BAAX01003830
184539
Bacillota
TCT
Arg
>WENV083224
BAAX01007731
298260
Bacillota
GTT
Asn
>WENV083071
BAAX01001338
183995
Bacillota
GGG
Pro
>WENV083149
BAAX01003760
184523
Bacillota
GAC
Val
>WENV083148
BAAX01003760
184523
Bacillota
GAC
Val
>WENV083297
BAAX01012334
398833
Bacillota
TGT
Thr
>WENV083279
BAAX01010827
398833
Bacillota
TGT
Thr
>WENV083117
BAAX01002779
398833
Bacillota
TGT
Thr
>WENV082980
BAAX01000029
100945
Bacillota
CAG
Leu
>WENV083099
BAAX01002436
403766
Bacillota
TTG
Gln
>WENV083459
BAAX01025185
175849
Bacillota
GTC
Asp
>WENV083345
BAAX01015668
175849
Bacillota
GTC
Asp
>WENV083208
BAAX01006298
175849
Bacillota
GTC
Asp
>WENV083133
BAAX01003305
175849
Bacillota
GTC
Asp
>WENV083018
BAAX01000383
489283
Bacillota
GCA
Cys
>WENV083048
BAAX01000810
280486
Bacillota
TGC
Ala
>WENV083108
BAAX01002579
280486
Bacillota
TGC
Ala
>WENV083416
BAAX01021879
280486
Bacillota
TGC
Ala
>WENV083325
BAAX01014130
405393
Bacillota
GCC
Gly
>WENV083131
BAAX01003138
56074
Bacillota
TGA
Ser
>WENV083118
BAAX01002783
56074
Bacillota
TGA
Ser
>WENV083407
BAAX01020708
280473
Bacillota
TGG
Pro
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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