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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
|
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
85 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV086625
BABG01000612
99852
Bacillota
GTA
Tyr
>WENV086797
BABG01009903
99852
Bacillota
GTA
Tyr
>WENV086554
BABG01000033
280500
Bacillota
TGC
Ala
>WENV086684
BABG01003157
280500
Bacillota
TGC
Ala
>WENV086694
BABG01003387
280500
Bacillota
TGC
Ala
>WENV086735
BABG01005899
405363
Bacillota
GCA
Cys
>WENV086831
BABG01012486
290391
Bacillota
TAC
Val
>WENV086733
BABG01005899
280428
Bacillota
GAA
Phe
>WENV086683
BABG01003044
280492
Bacillota
CTT
Lys
>WENV086893
BABG01020390
175842
Bacillota
CAC
Val
>WENV086778
BABG01008494
175842
Bacillota
CAC
Val
>WENV086595
BABG01000186
175842
Bacillota
CAC
Val
>WENV086959
BABG01033000
184497
Bacillota
GGG
Pro
>WENV086869
BABG01016141
179176
Bacillota
ACG
Arg
>WENV086839
BABG01013097
101000
Bacillota
GTA
Tyr
>WENV086864
BABG01015882
295166
Bacillota
TGC
Ala
>WENV086862
BABG01015463
295166
Bacillota
TGC
Ala
>WENV086851
BABG01013751
295166
Bacillota
TGC
Ala
>WENV086656
BABG01001882
295166
Bacillota
TGC
Ala
>WENV086577
BABG01000081
190476
Bacillota
CAT
Met
>WENV086947
BABG01029349
190476
Bacillota
CAT
Met
>WENV086716
BABG01004574
280447
Bacillota
GAC
Val
>WENV086700
BABG01003656
5692
Bacillota
GCT
Ser
>WENV086652
BABG01001611
175825
Bacillota
GAT
Ile
>WENV086607
BABG01000480
175825
Bacillota
GAT
Ile
>WENV086583
BABG01000108
175825
Bacillota
GAT
Ile
>WENV086572
BABG01000051
175825
Bacillota
GAT
Ile
>WENV086897
BABG01020664
73009
Bacillota
CAG
Leu
>WENV086878
BABG01017300
73009
Bacillota
CAG
Leu
>WENV086780
BABG01008609
73009
Bacillota
CAG
Leu
>WENV086769
BABG01007218
73009
Bacillota
CAG
Leu
>WENV086758
BABG01007090
73009
Bacillota
CAG
Leu
>WENV086633
BABG01000858
73009
Bacillota
CAG
Leu
>WENV086703
BABG01003900
175859
Bacillota
TCT
Arg
>WENV086671
BABG01002645
175859
Bacillota
TCT
Arg
>WENV086663
BABG01002368
280436
Bacillota
TGC
Ala
>WENV086651
BABG01001611
280436
Bacillota
TGC
Ala
>WENV086608
BABG01000480
280436
Bacillota
TGC
Ala
>WENV086584
BABG01000108
280436
Bacillota
TGC
Ala
>WENV086571
BABG01000051
280436
Bacillota
TGC
Ala
>WENV086837
BABG01012965
175831
Bacillota
ACG
Arg
>WENV086581
BABG01000097
175831
Bacillota
ACG
Arg
>WENV086937
BABG01028445
195824
Bacillota
GAT
Ile
>WENV086548
BABG01000027
282730
Bacillota
TAC
Val
>WENV086553
BABG01000033
175916
Bacillota
GAT
Ile
>WENV086549
BABG01000027
283727
Bacillota
TGC
Ala
>WENV086856
BABG01014323
480322
Bacillota
CTG
Gln
>WENV086759
BABG01007107
480322
Bacillota
CTG
Gln
>WENV086677
BABG01002735
175868
Bacillota
GTT
Asn
>WENV086599
BABG01000265
398854
Bacillota
CTC
Glu
>WENV086586
BABG01000120
398854
Bacillota
CTC
Glu
>WENV086927
BABG01024882
291576
Bacillota
CCC
Gly
>WENV086728
BABG01005434
291576
Bacillota
CCC
Gly
>WENV086928
BABG01025501
480324
Bacillota
TTG
Gln
>WENV086830
BABG01012486
180688
Bacillota
GTC
Asp
>WENV086745
BABG01006105
175899
Bacillota
GTC
Asp
>WENV086566
BABG01000042
175899
Bacillota
GTC
Asp
>WENV086887
BABG01018802
56079
Bacillota
AAG
Leu
>WENV086742
BABG01006105
117745
Bacillota
GTA
Tyr
>WENV086873
BABG01016567
117745
Bacillota
GTA
Tyr
>WENV086918
BABG01022694
280444
Bacillota
GGT
Thr
>WENV086854
BABG01014283
280444
Bacillota
GGT
Thr
>WENV086550
BABG01000027
179264
Bacillota
GAT
Ile
>WENV086547
BABG01000027
284112
Bacillota
TTT
Lys
>WENV086946
BABG01029349
398832
Bacillota
TTC
Glu
>WENV086576
BABG01000081
398832
Bacillota
TTC
Glu
>WENV086657
BABG01001912
283367
Bacillota
GCC
Gly
>WENV086729
BABG01005800
280561
Bacillota
CAT
Met
>WENV086740
BABG01006105
280462
Bacillota
GAA
Phe
>WENV086701
BABG01003660
398852
Bacillota
CTC
Glu
>WENV086791
BABG01009363
280483
Bacillota
GAA
Phe
>WENV086911
BABG01022425
175857
Bacillota
GTG
His
>WENV086832
BABG01012486
285556
Bacillota
TGT
Thr
>WENV086917
BABG01022694
175849
Bacillota
GTC
Asp
>WENV086732
BABG01005899
175849
Bacillota
GTC
Asp
>WENV086913
BABG01022425
280463
Bacillota
TTT
Lys
>WENV086739
BABG01006105
280463
Bacillota
TTT
Lys
>WENV086636
BABG01001034
280486
Bacillota
TGC
Ala
>WENV086647
BABG01001397
280486
Bacillota
TGC
Ala
>WENV086835
BABG01012843
280486
Bacillota
TGC
Ala
>WENV086859
BABG01015078
280486
Bacillota
TGC
Ala
>WENV086962
BABG01033246
280486
Bacillota
TGC
Ala
>WENV086699
BABG01003656
56074
Bacillota
TGA
Ser
>WENV086815
BABG01011548
280473
Bacillota
TGG
Pro
>WENV086702
BABG01003674
280473
Bacillota
TGG
Pro
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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