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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
17 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV170018631
BBPD01000195
483989
Betaproteobacteria
>WENV170018690
BBPD01000373
198132
Betaproteobacteria
CAT
Met
>WENV170018698
BBPD01000415
282942
Betaproteobacteria
CCG
Arg
>WENV170018714
BBPD01000480
197278
Betaproteobacteria
CAT
Met
>WENV170018760
BBPD01000726
225043
Betaproteobacteria
ACG
Arg
>WENV170018774
BBPD01000840
100103
Betaproteobacteria
GTA
Tyr
>WENV170018779
BBPD01000853
227519
Betaproteobacteria
TTG
Gln
>WENV170018784
BBPD01000890
347462
Betaproteobacteria
CGT
Thr
>WENV170018795
BBPD01001031
284821
Betaproteobacteria
TTT
Lys
>WENV170018859
BBPD01001601
480973
Betaproteobacteria
GCA
Cys
>WENV170018871
BBPD01001717
227519
Betaproteobacteria
TTG
Gln
>WENV170018947
BBPD01002423
225043
Betaproteobacteria
ACG
Arg
>WENV170018957
BBPD01002553
208822
Betaproteobacteria
TTG
Gln
>WENV170018984
BBPD01002843
198132
Betaproteobacteria
CAT
Met
>WENV170019184
BBPD01005444
281681
Betaproteobacteria
TTT
Lys
>WENV170019258
BBPD01006858
225043
Betaproteobacteria
ACG
Arg
>WENV170019602
BBPD01023032
282942
Betaproteobacteria
CCG
Arg
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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