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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
25 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV170019741
BBPE01000386
225043
Betaproteobacteria
ACG
Arg
>WENV170019753
BBPE01000492
282942
Betaproteobacteria
CCG
Arg
>WENV170019765
BBPE01000613
208822
Betaproteobacteria
TTG
Gln
>WENV170019805
BBPE01000690
225043
Betaproteobacteria
ACG
Arg
>WENV170019828
BBPE01000816
282797
Betaproteobacteria
CTT
Lys
>WENV170019832
BBPE01000851
225043
Betaproteobacteria
ACG
Arg
>WENV170019862
BBPE01001061
212101
Betaproteobacteria
GAT
Ile
>WENV170019874
BBPE01001123
198132
Betaproteobacteria
CAT
Met
>WENV170019901
BBPE01001298
198132
Betaproteobacteria
CAT
Met
>WENV170019902
BBPE01001299
198132
Betaproteobacteria
CAT
Met
>WENV170019918
BBPE01001437
347462
Betaproteobacteria
CGT
Thr
>WENV170019923
BBPE01001486
284821
Betaproteobacteria
TTT
Lys
>WENV170019939
BBPE01001647
355923
Betaproteobacteria
TTC
Glu
>WENV170019943
BBPE01001705
178096
Betaproteobacteria
TCT
Arg
>WENV170019950
BBPE01001759
111196
Betaproteobacteria
GTA
Tyr
>WENV170019955
BBPE01001790
100103
Betaproteobacteria
GTA
Tyr
>WENV170020065
BBPE01002603
355697
Betaproteobacteria
GCC
Gly
>WENV170020088
BBPE01002819
111196
Betaproteobacteria
GTA
Tyr
>WENV170020173
BBPE01003634
483989
Betaproteobacteria
>WENV170020189
BBPE01003916
227519
Betaproteobacteria
TTG
Gln
>WENV170020214
BBPE01004256
227519
Betaproteobacteria
TTG
Gln
>WENV170020309
BBPE01005589
480973
Betaproteobacteria
GCA
Cys
>WENV170020328
BBPE01005816
483989
Betaproteobacteria
>WENV170020587
BBPE01013175
284821
Betaproteobacteria
TTT
Lys
>WENV170020609
BBPE01014052
282942
Betaproteobacteria
CCG
Arg
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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