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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
20 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV170059699
CDZH01057397
407608
Thermodesulfobacteriota
TTG
Gln
>WENV170059081
CDZH01033195
406378
Thermodesulfobacteriota
CCC
Gly
>WENV170059083
CDZH01033195
406378
Thermodesulfobacteriota
CCC
Gly
>WENV170060086
CDZH01073295
406378
Thermodesulfobacteriota
CCC
Gly
>WENV170060179
CDZH01077782
214925
Thermodesulfobacteriota
GTC
Asp
>WENV170058506
CDZH01011632
175867
Thermodesulfobacteriota
GGG
Pro
>WENV170059343
CDZH01043708
175867
Thermodesulfobacteriota
GGG
Pro
>WENV170060099
CDZH01074023
175867
Thermodesulfobacteriota
GGG
Pro
>WENV170060100
CDZH01074023
175867
Thermodesulfobacteriota
GGG
Pro
>WENV170059257
CDZH01040631
295177
Thermodesulfobacteriota
CTT
Lys
>WENV170059258
CDZH01040631
295177
Thermodesulfobacteriota
CTT
Lys
>WENV170059259
CDZH01040631
295177
Thermodesulfobacteriota
CTT
Lys
>WENV170059511
CDZH01050195
295177
Thermodesulfobacteriota
CTT
Lys
>WENV170059212
CDZH01038418
188874
Thermodesulfobacteriota
TTC
Glu
>WENV170059182
CDZH01036722
188874
Thermodesulfobacteriota
TTC
Glu
>WENV170059087
CDZH01033800
188874
Thermodesulfobacteriota
TTC
Glu
>WENV170058482
CDZH01010684
188874
Thermodesulfobacteriota
TTC
Glu
>WENV170058444
CDZH01008742
188874
Thermodesulfobacteriota
TTC
Glu
>WENV170060127
CDZH01075300
183758
Thermodesulfobacteriota
CCA
Trp
>WENV170059462
CDZH01048723
295271
Thermodesulfobacteriota
TTT
Lys
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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