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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
127 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV170074897
CDZT01013047
405363
Bacillota
GCA
Cys
>WENV170074559
CDZT01000026
289472
Bacillota
TTC
Glu
>WENV170075649
CDZT01041540
289472
Bacillota
TTC
Glu
>WENV170075798
CDZT01046187
289472
Bacillota
TTC
Glu
>WENV170076143
CDZT01057484
289472
Bacillota
TTC
Glu
>WENV170074725
CDZT01005796
280428
Bacillota
GAA
Phe
>WENV170075169
CDZT01023760
280428
Bacillota
GAA
Phe
>WENV170076216
CDZT01060318
280428
Bacillota
GAA
Phe
>WENV170074767
CDZT01007321
291579
Bacillota
GAA
Phe
>WENV170074555
CDZT01000026
424998
Bacillota
GCC
Gly
>WENV170075472
CDZT01035576
424998
Bacillota
GCC
Gly
>WENV170075645
CDZT01041540
424998
Bacillota
GCC
Gly
>WENV170076139
CDZT01057484
424998
Bacillota
GCC
Gly
>WENV170075167
CDZT01023760
280466
Bacillota
TAC
Val
>WENV170074688
CDZT01004897
280466
Bacillota
TAC
Val
>WENV170075686
CDZT01043137
183994
Bacillota
TCT
Arg
>WENV170074806
CDZT01009390
175842
Bacillota
CAC
Val
>WENV170075733
CDZT01044252
287289
Bacillota
GCC
Gly
>WENV170075189
CDZT01024652
287289
Bacillota
GCC
Gly
>WENV170076314
CDZT01064245
179563
Bacillota
GAT
Ile
>WENV170075795
CDZT01046187
289474
Bacillota
CCA
Trp
>WENV170076307
CDZT01063783
101000
Bacillota
GTA
Tyr
>WENV170076313
CDZT01064245
295166
Bacillota
TGC
Ala
>WENV170075807
CDZT01046694
215243
Bacillota
CAT
Met
>WENV170075190
CDZT01024652
215243
Bacillota
CAT
Met
>WENV170074947
CDZT01016880
215243
Bacillota
CAT
Met
>WENV170075203
CDZT01025224
190476
Bacillota
CAT
Met
>WENV170074830
CDZT01010465
190476
Bacillota
CAT
Met
>WENV170075436
CDZT01033950
184522
Bacillota
CCT
Arg
>WENV170076148
CDZT01058026
280447
Bacillota
GAC
Val
>WENV170075922
CDZT01050715
280447
Bacillota
GAC
Val
>WENV170075520
CDZT01037499
5692
Bacillota
GCT
Ser
>WENV170074674
CDZT01004591
47207
Bacillota
TGA
Ser
>WENV170074723
CDZT01005796
280427
Bacillota
TAC
Val
>WENV170075913
CDZT01050236
73009
Bacillota
CAG
Leu
>WENV170074964
CDZT01017471
73009
Bacillota
CAG
Leu
>WENV170076310
CDZT01063783
183993
Bacillota
CAT
Met
>WENV170075091
CDZT01021674
291581
Bacillota
CGG
Pro
>WENV170075281
CDZT01028611
175859
Bacillota
TCT
Arg
>WENV170076309
CDZT01063783
289149
Bacillota
GGT
Thr
>WENV170075358
CDZT01031694
290325
Bacillota
GCC
Gly
>WENV170074593
CDZT01001055
290325
Bacillota
GCC
Gly
>WENV170075468
CDZT01035561
175831
Bacillota
ACG
Arg
>WENV170075646
CDZT01041540
289147
Bacillota
GTT
Asn
>WENV170074556
CDZT01000026
289147
Bacillota
GTT
Asn
>WENV170075797
CDZT01046187
289147
Bacillota
GTT
Asn
>WENV170076140
CDZT01057484
289147
Bacillota
GTT
Asn
>WENV170074698
CDZT01004947
289475
Bacillota
GTG
His
>WENV170074648
CDZT01003881
295350
Bacillota
TGC
Ala
>WENV170074697
CDZT01004947
20913
Bacillota
GCT
Ser
>WENV170075605
CDZT01040987
480322
Bacillota
CTG
Gln
>WENV170075090
CDZT01021674
480322
Bacillota
CTG
Gln
>WENV170074636
CDZT01002894
480322
Bacillota
CTG
Gln
>WENV170076021
CDZT01052917
175868
Bacillota
GTT
Asn
>WENV170075310
CDZT01029228
175868
Bacillota
GTT
Asn
>WENV170075684
CDZT01043137
200900
Bacillota
TGG
Pro
>WENV170075470
CDZT01035576
184455
Bacillota
GTC
Asp
>WENV170075039
CDZT01019605
184455
Bacillota
GTC
Asp
>WENV170075036
CDZT01019605
184455
Bacillota
GTC
Asp
>WENV170075033
CDZT01019605
184455
Bacillota
GTC
Asp
>WENV170074678
CDZT01004591
184455
Bacillota
GTC
Asp
>WENV170074675
CDZT01004591
184455
Bacillota
GTC
Asp
>WENV170075104
CDZT01022168
289476
Bacillota
CGT
Thr
>WENV170075474
CDZT01035576
48832
Bacillota
TAA
Leu
>WENV170075326
CDZT01030105
398854
Bacillota
CTC
Glu
>WENV170074898
CDZT01013047
480324
Bacillota
TTG
Gln
>WENV170075650
CDZT01041540
292612
Bacillota
TAC
Val
>WENV170074560
CDZT01000026
292612
Bacillota
TAC
Val
>WENV170076291
CDZT01063746
303718
Bacillota
TGT
Thr
>WENV170075201
CDZT01025223
303718
Bacillota
TGT
Thr
>WENV170075140
CDZT01023207
303718
Bacillota
TGT
Thr
>WENV170076018
CDZT01052912
323864
Bacillota
TGC
Ala
>WENV170075738
CDZT01044253
323864
Bacillota
TGC
Ala
>WENV170075731
CDZT01044252
175911
Bacillota
GTC
Asp
>WENV170075487
CDZT01035796
175911
Bacillota
GTC
Asp
>WENV170074628
CDZT01002888
175911
Bacillota
GTC
Asp
>WENV170075599
CDZT01040965
292374
Bacillota
TGC
Ala
>WENV170076141
CDZT01057484
403952
Bacillota
CTG
Gln
>WENV170075647
CDZT01041540
403952
Bacillota
CTG
Gln
>WENV170074557
CDZT01000026
403952
Bacillota
CTG
Gln
>WENV170075616
CDZT01040993
186051
Bacillota
GAT
Ile
>WENV170075314
CDZT01029569
280444
Bacillota
GGT
Thr
>WENV170075312
CDZT01029569
280444
Bacillota
GGT
Thr
>WENV170074921
CDZT01014991
280444
Bacillota
GGT
Thr
>WENV170075038
CDZT01019605
100999
Bacillota
GAG
Leu
>WENV170075035
CDZT01019605
100999
Bacillota
GAG
Leu
>WENV170074677
CDZT01004591
100999
Bacillota
GAG
Leu
>WENV170074679
CDZT01004591
100999
Bacillota
GAG
Leu
>WENV170076217
CDZT01060318
321753
Bacillota
GCC
Gly
>WENV170075400
CDZT01033019
321753
Bacillota
GCC
Gly
>WENV170075170
CDZT01023760
321753
Bacillota
GCC
Gly
>WENV170074896
CDZT01013047
321753
Bacillota
GCC
Gly
>WENV170074687
CDZT01004897
321753
Bacillota
GCC
Gly
>WENV170074621
CDZT01002413
15649
Bacillota
GGA
Ser
>WENV170074558
CDZT01000026
289745
Bacillota
TTT
Lys
>WENV170075648
CDZT01041540
289745
Bacillota
TTT
Lys
>WENV170076142
CDZT01057484
289745
Bacillota
TTT
Lys
>WENV170076031
CDZT01053360
179755
Bacillota
CCG
Arg
>WENV170075819
CDZT01047055
179755
Bacillota
CCG
Arg
>WENV170075510
CDZT01036980
179755
Bacillota
CCG
Arg
>WENV170075087
CDZT01021469
291650
Bacillota
TGC
Ala
>WENV170076272
CDZT01063215
289154
Bacillota
CTT
Lys
>WENV170075204
CDZT01025224
398832
Bacillota
TTC
Glu
>WENV170074831
CDZT01010465
398832
Bacillota
TTC
Glu
>WENV170075521
CDZT01037576
280476
Bacillota
TTT
Lys
>WENV170075687
CDZT01043137
404085
Bacillota
CCG
Arg
>WENV170075974
CDZT01051716
201856
Bacillota
GAT
Ile
>WENV170075598
CDZT01040965
201856
Bacillota
GAT
Ile
>WENV170074787
CDZT01008225
201856
Bacillota
GAT
Ile
>WENV170074839
CDZT01010840
280483
Bacillota
GAA
Phe
>WENV170075484
CDZT01035796
298260
Bacillota
GTT
Asn
>WENV170074701
CDZT01004947
183995
Bacillota
GGG
Pro
>WENV170075877
CDZT01049383
285601
Bacillota
TTC
Glu
>WENV170075025
CDZT01019585
285756
Bacillota
GCC
Gly
>WENV170076302
CDZT01063757
184523
Bacillota
GAC
Val
>WENV170074890
CDZT01012982
398833
Bacillota
TGT
Thr
>WENV170074699
CDZT01004947
403766
Bacillota
TTG
Gln
>WENV170075168
CDZT01023760
175849
Bacillota
GTC
Asp
>WENV170074920
CDZT01014991
175849
Bacillota
GTC
Asp
>WENV170074895
CDZT01013047
175849
Bacillota
GTC
Asp
>WENV170074689
CDZT01004897
175849
Bacillota
GTC
Asp
>WENV170075313
CDZT01029569
175849
Bacillota
GTC
Asp
>WENV170075315
CDZT01029569
175849
Bacillota
GTC
Asp
>WENV170075473
CDZT01035576
489283
Bacillota
GCA
Cys
>WENV170075103
CDZT01022166
405393
Bacillota
GCC
Gly
>WENV170075519
CDZT01037499
56074
Bacillota
TGA
Ser
>WENV170075720
CDZT01044135
280473
Bacillota
TGG
Pro
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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