This is the navigation skips to jump to main contents
Jump to main contents.
tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
Top
|
Keyword
|
BLAST
|
Download
|
HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
85 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV170112503
CEGF01001912
180052
Gammaproteobacteria
CCT
Arg
>WENV170112562
CEGF01003495
363863
Gammaproteobacteria
CCA
Trp
>WENV170112609
CEGF01006051
487002
Gammaproteobacteria
GCA
Cys
>WENV170112652
CEGF01009125
487002
Gammaproteobacteria
GCA
Cys
>WENV170112683
CEGF01012714
283283
Gammaproteobacteria
TAC
Val
>WENV170112599
CEGF01005582
73502
Gammaproteobacteria
CAG
Leu
>WENV170112493
CEGF01001358
178539
Gammaproteobacteria
GAC
Val
>WENV170112655
CEGF01009207
178539
Gammaproteobacteria
GAC
Val
>WENV170112677
CEGF01011775
178539
Gammaproteobacteria
GAC
Val
>WENV170112579
CEGF01004642
318157
Gammaproteobacteria
GTT
Asn
>WENV170112580
CEGF01004642
318157
Gammaproteobacteria
GTT
Asn
>WENV170112581
CEGF01004642
318157
Gammaproteobacteria
GTT
Asn
>WENV170112630
CEGF01007922
318157
Gammaproteobacteria
GTT
Asn
>WENV170112563
CEGF01003581
118218
Gammaproteobacteria
TAG
Leu
>WENV170112635
CEGF01008118
118218
Gammaproteobacteria
TAG
Leu
>WENV170112595
CEGF01005582
178544
Gammaproteobacteria
CAT
Met
>WENV170112557
CEGF01003276
197233
Gammaproteobacteria
CAT
Met
>WENV170112558
CEGF01003293
197233
Gammaproteobacteria
CAT
Met
>WENV170112593
CEGF01005580
197233
Gammaproteobacteria
CAT
Met
>WENV170112594
CEGF01005581
197233
Gammaproteobacteria
CAT
Met
>WENV170112656
CEGF01009734
29834
Gammaproteobacteria
GCT
Ser
>WENV170112612
CEGF01006601
178777
Gammaproteobacteria
CCG
Arg
>WENV170112613
CEGF01006602
178777
Gammaproteobacteria
CCG
Arg
>WENV170112694
CEGF01015424
481036
Gammaproteobacteria
GCA
Cys
>WENV170112489
CEGF01001241
178538
Gammaproteobacteria
GTC
Asp
>WENV170112491
CEGF01001241
178538
Gammaproteobacteria
GTC
Asp
>WENV170112647
CEGF01008923
178538
Gammaproteobacteria
GTC
Asp
>WENV170112649
CEGF01008923
178538
Gammaproteobacteria
GTC
Asp
>WENV170112665
CEGF01010476
178538
Gammaproteobacteria
GTC
Asp
>WENV170112666
CEGF01010476
178538
Gammaproteobacteria
GTC
Asp
>WENV170112668
CEGF01010476
178538
Gammaproteobacteria
GTC
Asp
>WENV170112536
CEGF01002643
284693
Gammaproteobacteria
TTC
Glu
>WENV170112555
CEGF01003143
284693
Gammaproteobacteria
TTC
Glu
>WENV170112678
CEGF01011851
73501
Gammaproteobacteria
GAG
Leu
>WENV170112524
CEGF01002341
73501
Gammaproteobacteria
GAG
Leu
>WENV170112516
CEGF01002036
140925
Gammaproteobacteria
GTA
Tyr
>WENV170112688
CEGF01014569
283282
Gammaproteobacteria
TTT
Lys
>WENV170112465
CEGF01000513
176868
Gammaproteobacteria
CAT
Met
>WENV170112504
CEGF01001979
176868
Gammaproteobacteria
CAT
Met
>WENV170112619
CEGF01007224
176868
Gammaproteobacteria
CAT
Met
>WENV170112636
CEGF01008173
281282
Gammaproteobacteria
TTC
Glu
>WENV170112532
CEGF01002615
444310
Gammaproteobacteria
TTG
Gln
>WENV170112534
CEGF01002627
444310
Gammaproteobacteria
TTG
Gln
>WENV170112578
CEGF01004307
444310
Gammaproteobacteria
TTG
Gln
>WENV170112616
CEGF01007179
190706
Gammaproteobacteria
ACG
Arg
>WENV170112617
CEGF01007179
190706
Gammaproteobacteria
ACG
Arg
>WENV170112661
CEGF01009926
190706
Gammaproteobacteria
ACG
Arg
>WENV170112662
CEGF01009926
190706
Gammaproteobacteria
ACG
Arg
>WENV170112690
CEGF01014920
329164
Gammaproteobacteria
TTT
Lys
>WENV170112680
CEGF01012000
178535
Gammaproteobacteria
CCT
Arg
>WENV170112499
CEGF01001682
178535
Gammaproteobacteria
CCT
Arg
>WENV170112681
CEGF01012509
178535
Gammaproteobacteria
CCT
Arg
>WENV170112692
CEGF01015028
178535
Gammaproteobacteria
CCT
Arg
>WENV170112596
CEGF01005582
118219
Gammaproteobacteria
TAG
Leu
>WENV170112644
CEGF01008683
20410
Gammaproteobacteria
TGA
Ser
>WENV170112650
CEGF01009098
73498
Gammaproteobacteria
CAA
Leu
>WENV170112576
CEGF01004167
480516
Gammaproteobacteria
GCA
Cys
>WENV170112614
CEGF01006660
178541
Gammaproteobacteria
CGG
Pro
>WENV170112561
CEGF01003495
443066
Gammaproteobacteria
GGT
Thr
>WENV170112691
CEGF01014996
280812
Gammaproteobacteria
GAA
Phe
>WENV170112597
CEGF01005582
400402
Gammaproteobacteria
TTG
Gln
>WENV170112598
CEGF01005582
400402
Gammaproteobacteria
TTG
Gln
>WENV170112533
CEGF01002627
282922
Gammaproteobacteria
GAA
Phe
>WENV170112682
CEGF01012588
282922
Gammaproteobacteria
GAA
Phe
>WENV170112575
CEGF01004167
306288
Gammaproteobacteria
GCC
Gly
>WENV170112605
CEGF01006038
306288
Gammaproteobacteria
GCC
Gly
>WENV170112483
CEGF01001035
335783
Gammaproteobacteria
GTT
Asn
>WENV170112482
CEGF01001035
335783
Gammaproteobacteria
GTT
Asn
>WENV170112624
CEGF01007486
334421
Gammaproteobacteria
TGT
Thr
>WENV170112537
CEGF01002673
346373
Gammaproteobacteria
GAA
Phe
>WENV170112620
CEGF01007239
196907
Gammaproteobacteria
GAC
Val
>WENV170112572
CEGF01004122
89769
Gammaproteobacteria
CAG
Leu
>WENV170112570
CEGF01004122
89769
Gammaproteobacteria
CAG
Leu
>WENV170112478
CEGF01000890
8609
Gammaproteobacteria
GCT
Ser
>WENV170112615
CEGF01007179
8667
Gammaproteobacteria
GCT
Ser
>WENV170112660
CEGF01009926
8667
Gammaproteobacteria
GCT
Ser
>WENV170112477
CEGF01000889
56412
Gammaproteobacteria
GGA
Ser
>WENV170112587
CEGF01005245
176478
Gammaproteobacteria
CAT
Met
>WENV170112623
CEGF01007485
119044
Gammaproteobacteria
GTA
Tyr
>WENV170112625
CEGF01007486
119044
Gammaproteobacteria
GTA
Tyr
>WENV170112626
CEGF01007486
408063
Gammaproteobacteria
TCC
Gly
>WENV170112515
CEGF01002036
282902
Gammaproteobacteria
TGT
Thr
>WENV170112589
CEGF01005282
140861
Gammaproteobacteria
GTA
Tyr
>WENV170112689
CEGF01014612
140861
Gammaproteobacteria
GTA
Tyr
>WENV170112541
CEGF01002695
184457
Gammaproteobacteria
GGG
Pro
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
BACK