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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
18 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV170151823
CEOE01000227
431636
Alphaproteobacteria
CTC
Glu
>WENV170151841
CEOE01002492
299509
Alphaproteobacteria
GTT
Asn
>WENV170151959
CEOE01011146
442504
Alphaproteobacteria
CAC
Val
>WENV170151981
CEOE01013625
190609
Alphaproteobacteria
TCT
Arg
>WENV170152033
CEOE01022557
118213
Alphaproteobacteria
TAG
Leu
>WENV170152047
CEOE01023884
482973
Alphaproteobacteria
TCC
Gly
>WENV170152071
CEOE01030193
190614
Alphaproteobacteria
TGG
Pro
>WENV170152075
CEOE01030640
233665
Alphaproteobacteria
CCT
Arg
>WENV170152119
CEOE01038099
283510
Alphaproteobacteria
TTT
Lys
>WENV170152133
CEOE01041467
299458
Alphaproteobacteria
TTT
Lys
>WENV170152136
CEOE01042114
73374
Alphaproteobacteria
CAG
Leu
>WENV170152158
CEOE01045715
400544
Alphaproteobacteria
GGT
Thr
>WENV170152195
CEOE01050561
439135
Alphaproteobacteria
CAC
Val
>WENV170152258
CEOE01062507
179941
Alphaproteobacteria
CAT
Met
>WENV170152265
CEOE01066310
20437
Alphaproteobacteria
GGA
Ser
>WENV170152276
CEOE01070380
100185
Alphaproteobacteria
GAG
Leu
>WENV170152305
CEOE01081576
179639
Alphaproteobacteria
ACG
Arg
>WENV170152337
CEOE01091684
481326
Alphaproteobacteria
GCA
Cys
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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