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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
17 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV170186927
CEPA01098773
201940
Alphaproteobacteria
CAT
Met
>WENV170187052
CEPA01114346
201940
Alphaproteobacteria
CAT
Met
>WENV170186892
CEPA01095205
210541
Alphaproteobacteria
CAT
Met
>WENV170187589
CEPA01171574
178237
Alphaproteobacteria
CAT
Met
>WENV170186067
CEPA01015630
308123
Alphaproteobacteria
CCA
Trp
>WENV170185922
CEPA01003135
75222
Alphaproteobacteria
GAG
Leu
>WENV170186383
CEPA01042722
193088
Alphaproteobacteria
GAT
Ile
>WENV170186386
CEPA01043123
29702
Alphaproteobacteria
GGA
Ser
>WENV170187136
CEPA01124369
197241
Alphaproteobacteria
GGG
Pro
>WENV170186755
CEPA01080976
400544
Alphaproteobacteria
GGT
Thr
>WENV170186958
CEPA01102393
398994
Alphaproteobacteria
GTT
Asn
>WENV170187114
CEPA01122561
398994
Alphaproteobacteria
GTT
Asn
>WENV170186180
CEPA01023792
314617
Alphaproteobacteria
TAC
Val
>WENV170186024
CEPA01012115
314617
Alphaproteobacteria
TAC
Val
>WENV170186751
CEPA01080372
481268
Alphaproteobacteria
TCC
Gly
>WENV170185981
CEPA01009962
290043
Alphaproteobacteria
TGC
Ala
>WENV170187847
CEPA01293561
290043
Alphaproteobacteria
TGC
Ala
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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