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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
|
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
22 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV170194620
CEPJ01049193
360947
Alphaproteobacteria
TTT
Lys
>WENV170193979
CEPJ01001362
424450
Alphaproteobacteria
GGT
Thr
>WENV170195549
CEPJ01142110
404592
Alphaproteobacteria
GGT
Thr
>WENV170194632
CEPJ01049504
375285
Alphaproteobacteria
TAC
Val
>WENV170195353
CEPJ01127805
375285
Alphaproteobacteria
TAC
Val
>WENV170194606
CEPJ01047172
201940
Alphaproteobacteria
CAT
Met
>WENV170194615
CEPJ01048734
201940
Alphaproteobacteria
CAT
Met
>WENV170195195
CEPJ01110305
201940
Alphaproteobacteria
CAT
Met
>WENV170195343
CEPJ01127322
201940
Alphaproteobacteria
CAT
Met
>WENV170195401
CEPJ01132181
197241
Alphaproteobacteria
GGG
Pro
>WENV170194900
CEPJ01079544
509917
Alphaproteobacteria
TCC
Gly
>WENV170194243
CEPJ01020997
75222
Alphaproteobacteria
GAG
Leu
>WENV170194838
CEPJ01072639
318352
Alphaproteobacteria
CCA
Trp
>WENV170194774
CEPJ01065614
435083
Alphaproteobacteria
>WENV170195020
CEPJ01092117
435083
Alphaproteobacteria
>WENV170195408
CEPJ01132713
400544
Alphaproteobacteria
GGT
Thr
>WENV170194572
CEPJ01044166
145377
Alphaproteobacteria
>WENV170194316
CEPJ01025826
212319
Alphaproteobacteria
GTG
His
>WENV170194331
CEPJ01026512
398994
Alphaproteobacteria
GTT
Asn
>WENV170194733
CEPJ01060727
398994
Alphaproteobacteria
GTT
Asn
>WENV170195574
CEPJ01142940
178237
Alphaproteobacteria
CAT
Met
>WENV170195655
CEPJ01194995
289744
Alphaproteobacteria
CGT
Thr
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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