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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
|
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
50 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV170264910
CERD01083772
296698
Alphaproteobacteria
CGC
Ala
>WENV170265488
CERD01197622
482973
Alphaproteobacteria
TCC
Gly
>WENV170265458
CERD01186248
179894
Alphaproteobacteria
CCG
Arg
>WENV170265111
CERD01109444
193463
Alphaproteobacteria
CCT
Arg
>WENV170265403
CERD01158261
178725
Alphaproteobacteria
GTG
His
>WENV170264867
CERD01079479
140893
Alphaproteobacteria
CAA
Leu
>WENV170265435
CERD01174531
400518
Alphaproteobacteria
GAA
Phe
>WENV170264515
CERD01040252
400518
Alphaproteobacteria
GAA
Phe
>WENV170264579
CERD01047541
400530
Alphaproteobacteria
GAC
Val
>WENV170265055
CERD01104997
195445
Alphaproteobacteria
CAT
Met
>WENV170265071
CERD01105984
288727
Alphaproteobacteria
>WENV170264387
CERD01030130
487436
Alphaproteobacteria
TCC
Gly
>WENV170264987
CERD01096822
100096
Alphaproteobacteria
TAA
Leu
>WENV170265068
CERD01105907
305403
Alphaproteobacteria
>WENV170264242
CERD01016812
403836
Alphaproteobacteria
>WENV170264590
CERD01048166
399340
Alphaproteobacteria
GTT
Asn
>WENV170264591
CERD01048167
399340
Alphaproteobacteria
GTT
Asn
>WENV170264321
CERD01025791
400514
Alphaproteobacteria
TTG
Gln
>WENV170265136
CERD01112389
180029
Alphaproteobacteria
CAT
Met
>WENV170265424
CERD01169061
181950
Alphaproteobacteria
TCT
Arg
>WENV170264228
CERD01016194
121250
Alphaproteobacteria
TAG
Leu
>WENV170264858
CERD01078370
102146
Alphaproteobacteria
GTA
Tyr
>WENV170265128
CERD01111190
102146
Alphaproteobacteria
GTA
Tyr
>WENV170265010
CERD01099297
435083
Alphaproteobacteria
>WENV170265196
CERD01118723
73167
Alphaproteobacteria
GAG
Leu
>WENV170264760
CERD01067038
192275
Alphaproteobacteria
GTG
His
>WENV170264085
CERD01003753
400517
Alphaproteobacteria
GGT
Thr
>WENV170264596
CERD01048658
281650
Alphaproteobacteria
CCA
Trp
>WENV170264196
CERD01013522
481098
Alphaproteobacteria
CTG
Gln
>WENV170264576
CERD01047357
231487
Alphaproteobacteria
TCT
Arg
>WENV170264473
CERD01035922
284698
Alphaproteobacteria
TTT
Lys
>WENV170264952
CERD01091224
400048
Alphaproteobacteria
GGT
Thr
>WENV170265198
CERD01118960
13331
Alphaproteobacteria
GCT
Ser
>WENV170264801
CERD01070541
403581
Alphaproteobacteria
TTG
Gln
>WENV170264932
CERD01087776
399000
Alphaproteobacteria
TTC
Glu
>WENV170264467
CERD01035427
282981
Alphaproteobacteria
CCA
Trp
>WENV170264471
CERD01035811
282981
Alphaproteobacteria
CCA
Trp
>WENV170265581
CERD01224928
400106
Alphaproteobacteria
GTT
Asn
>WENV170264793
CERD01069995
229944
Alphaproteobacteria
CGG
Pro
>WENV170265233
CERD01121790
481099
Alphaproteobacteria
TCC
Gly
>WENV170264469
CERD01035491
481099
Alphaproteobacteria
TCC
Gly
>WENV170264420
CERD01032662
481099
Alphaproteobacteria
TCC
Gly
>WENV170265537
CERD01213177
190609
Alphaproteobacteria
TCT
Arg
>WENV170264807
CERD01071409
404182
Alphaproteobacteria
CAC
Val
>WENV170264959
CERD01092849
282980
Alphaproteobacteria
TGT
Thr
>WENV170265447
CERD01181718
195438
Alphaproteobacteria
GAT
Ile
>WENV170264845
CERD01076287
305449
Alphaproteobacteria
CGT
Thr
>WENV170264550
CERD01044503
13340
Alphaproteobacteria
GCT
Ser
>WENV170264796
CERD01070258
73523
Alphaproteobacteria
CAG
Leu
>WENV170264464
CERD01035298
73523
Alphaproteobacteria
CAG
Leu
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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