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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
59 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV170293848
CESC01014038
242732
Gammaproteobacteria
ACG
Arg
>WENV170293849
CESC01014038
242732
Gammaproteobacteria
ACG
Arg
>WENV170294569
CESC01091557
242732
Gammaproteobacteria
ACG
Arg
>WENV170293830
CESC01012742
178550
Gammaproteobacteria
ACG
Arg
>WENV170293831
CESC01012742
178550
Gammaproteobacteria
ACG
Arg
>WENV170294519
CESC01085682
178550
Gammaproteobacteria
ACG
Arg
>WENV170293759
CESC01007981
186591
Gammaproteobacteria
ACG
Arg
>WENV170294346
CESC01065808
73123
Gammaproteobacteria
CAA
Leu
>WENV170294328
CESC01063318
73498
Gammaproteobacteria
CAA
Leu
>WENV170293792
CESC01010754
81474
Gammaproteobacteria
CAG
Leu
>WENV170293793
CESC01010754
81474
Gammaproteobacteria
CAG
Leu
>WENV170293790
CESC01010331
176520
Gammaproteobacteria
CAT
Met
>WENV170294350
CESC01066447
176520
Gammaproteobacteria
CAT
Met
>WENV170294254
CESC01054441
176545
Gammaproteobacteria
CAT
Met
>WENV170294251
CESC01054083
180678
Gammaproteobacteria
CCG
Arg
>WENV170294010
CESC01029212
180678
Gammaproteobacteria
CCG
Arg
>WENV170294290
CESC01057974
176664
Gammaproteobacteria
CCT
Arg
>WENV170293822
CESC01012219
346373
Gammaproteobacteria
GAA
Phe
>WENV170293958
CESC01024736
346373
Gammaproteobacteria
GAA
Phe
>WENV170294207
CESC01048281
346373
Gammaproteobacteria
GAA
Phe
>WENV170293781
CESC01009627
178539
Gammaproteobacteria
GAC
Val
>WENV170294391
CESC01069830
218635
Gammaproteobacteria
GAC
Val
>WENV170294450
CESC01077828
180680
Gammaproteobacteria
GAC
Val
>WENV170294111
CESC01038260
180680
Gammaproteobacteria
GAC
Val
>WENV170293945
CESC01023305
180680
Gammaproteobacteria
GAC
Val
>WENV170294396
CESC01070168
73501
Gammaproteobacteria
GAG
Leu
>WENV170293720
CESC01003778
178164
Gammaproteobacteria
GAT
Ile
>WENV170293679
CESC01000435
176301
Gammaproteobacteria
GAT
Ile
>WENV170293715
CESC01003116
483085
Gammaproteobacteria
GCA
Cys
>WENV170294015
CESC01029509
480516
Gammaproteobacteria
GCA
Cys
>WENV170293768
CESC01008487
306288
Gammaproteobacteria
GCC
Gly
>WENV170294286
CESC01057703
306288
Gammaproteobacteria
GCC
Gly
>WENV170294349
CESC01066320
306288
Gammaproteobacteria
GCC
Gly
>WENV170293740
CESC01005764
56694
Gammaproteobacteria
GGA
Ser
>WENV170294578
CESC01092203
370389
Gammaproteobacteria
GGC
Ala
>WENV170294473
CESC01080405
176663
Gammaproteobacteria
GGG
Pro
>WENV170293742
CESC01006145
178533
Gammaproteobacteria
GGG
Pro
>WENV170294419
CESC01073031
184457
Gammaproteobacteria
GGG
Pro
>WENV170293757
CESC01007535
140925
Gammaproteobacteria
GTA
Tyr
>WENV170293907
CESC01018567
141076
Gammaproteobacteria
GTA
Tyr
>WENV170293796
CESC01010836
118413
Gammaproteobacteria
TAG
Leu
>WENV170294545
CESC01088785
20968
Gammaproteobacteria
TGA
Ser
>WENV170294179
CESC01046257
297858
Gammaproteobacteria
TGC
Ala
>WENV170294471
CESC01080123
292006
Gammaproteobacteria
TGC
Ala
>WENV170294021
CESC01029932
178540
Gammaproteobacteria
TGG
Pro
>WENV170294373
CESC01068363
181513
Gammaproteobacteria
TGG
Pro
>WENV170293804
CESC01011209
197498
Gammaproteobacteria
TGG
Pro
>WENV170294539
CESC01088333
281440
Gammaproteobacteria
TGT
Thr
>WENV170294236
CESC01051398
285363
Gammaproteobacteria
TGT
Thr
>WENV170294310
CESC01060544
334421
Gammaproteobacteria
TGT
Thr
>WENV170294494
CESC01083312
315775
Gammaproteobacteria
TGT
Thr
>WENV170294145
CESC01041896
282902
Gammaproteobacteria
TGT
Thr
>WENV170294165
CESC01044026
444310
Gammaproteobacteria
TTG
Gln
>WENV170294169
CESC01044604
330451
Gammaproteobacteria
TTG
Gln
>WENV170294108
CESC01037636
299414
Gammaproteobacteria
TTT
Lys
>WENV170293818
CESC01012111
329164
Gammaproteobacteria
TTT
Lys
>WENV170293743
CESC01006337
329164
Gammaproteobacteria
TTT
Lys
>WENV170293769
CESC01008510
329164
Gammaproteobacteria
TTT
Lys
>WENV170294508
CESC01084107
351236
Gammaproteobacteria
TTT
Lys
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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