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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
53 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV170361313
CETM01001837
178539
Gammaproteobacteria
GAC
Val
>WENV170361318
CETM01002072
176301
Gammaproteobacteria
GAT
Ile
>WENV170361369
CETM01004265
197233
Gammaproteobacteria
CAT
Met
>WENV170361370
CETM01004265
286623
Gammaproteobacteria
GTT
Asn
>WENV170361371
CETM01004265
286623
Gammaproteobacteria
GTT
Asn
>WENV170361372
CETM01004265
286623
Gammaproteobacteria
GTT
Asn
>WENV170361374
CETM01004265
197233
Gammaproteobacteria
CAT
Met
>WENV170361460
CETM01009274
176868
Gammaproteobacteria
CAT
Met
>WENV170361499
CETM01011656
197233
Gammaproteobacteria
CAT
Met
>WENV170361531
CETM01012410
89769
Gammaproteobacteria
CAG
Leu
>WENV170361534
CETM01012410
89769
Gammaproteobacteria
CAG
Leu
>WENV170361552
CETM01013314
176301
Gammaproteobacteria
GAT
Ile
>WENV170361773
CETM01027326
178473
Gammaproteobacteria
TGG
Pro
>WENV170361774
CETM01027326
185098
Gammaproteobacteria
TCT
Arg
>WENV170361776
CETM01027464
20618
Gammaproteobacteria
GGA
Ser
>WENV170361795
CETM01028070
290408
Gammaproteobacteria
GCC
Gly
>WENV170361820
CETM01029743
184459
Gammaproteobacteria
CAT
Met
>WENV170361833
CETM01030111
8667
Gammaproteobacteria
GCT
Ser
>WENV170361834
CETM01030111
181520
Gammaproteobacteria
ACG
Arg
>WENV170361835
CETM01030111
181520
Gammaproteobacteria
ACG
Arg
>WENV170361866
CETM01031289
183804
Gammaproteobacteria
CAT
Met
>WENV170361897
CETM01033696
178467
Gammaproteobacteria
GGG
Pro
>WENV170361901
CETM01034234
89769
Gammaproteobacteria
CAG
Leu
>WENV170361922
CETM01035704
178473
Gammaproteobacteria
TGG
Pro
>WENV170361923
CETM01035704
184230
Gammaproteobacteria
TCT
Arg
>WENV170361944
CETM01036432
487002
Gammaproteobacteria
GCA
Cys
>WENV170361956
CETM01037278
285363
Gammaproteobacteria
TGT
Thr
>WENV170362089
CETM01045028
118207
Gammaproteobacteria
GAG
Leu
>WENV170362223
CETM01056378
180679
Gammaproteobacteria
CCA
Trp
>WENV170362241
CETM01057398
451238
Gammaproteobacteria
GCC
Gly
>WENV170362249
CETM01057578
180680
Gammaproteobacteria
GAC
Val
>WENV170362399
CETM01069036
481325
Gammaproteobacteria
TCC
Gly
>WENV170362427
CETM01070855
176518
Gammaproteobacteria
CAT
Met
>WENV170362434
CETM01071241
400372
Gammaproteobacteria
CCT
Arg
>WENV170362441
CETM01071935
189904
Gammaproteobacteria
CCA
Trp
>WENV170362491
CETM01075696
179286
Gammaproteobacteria
GGG
Pro
>WENV170362528
CETM01078118
370389
Gammaproteobacteria
GGC
Ala
>WENV170362675
CETM01091459
74339
Gammaproteobacteria
GAG
Leu
>WENV170362719
CETM01095536
178466
Gammaproteobacteria
CCA
Trp
>WENV170363018
CETM01119372
284132
Gammaproteobacteria
TTT
Lys
>WENV170363214
CETM01137665
370389
Gammaproteobacteria
GGC
Ala
>WENV170363216
CETM01137955
177028
Gammaproteobacteria
CAT
Met
>WENV170363247
CETM01141473
178469
Gammaproteobacteria
CAT
Met
>WENV170363365
CETM01153409
196907
Gammaproteobacteria
GAC
Val
>WENV170363374
CETM01154397
315775
Gammaproteobacteria
TGT
Thr
>WENV170363466
CETM01162601
196907
Gammaproteobacteria
GAC
Val
>WENV170363629
CETM01175750
180680
Gammaproteobacteria
GAC
Val
>WENV170363818
CETM01190079
63431
Gammaproteobacteria
GGA
Ser
>WENV170363982
CETM01197697
290359
Gammaproteobacteria
TTT
Lys
>WENV170364674
CETM01387996
118413
Gammaproteobacteria
TAG
Leu
>WENV170364699
CETM01395994
292006
Gammaproteobacteria
TGC
Ala
>WENV170364815
CETM01439768
400372
Gammaproteobacteria
CCT
Arg
>WENV170364957
CETM01456837
284706
Gammaproteobacteria
GTT
Asn
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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