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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
24 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV170378557
CETV01028969
283559
Alphaproteobacteria
CGC
Ala
>WENV170379597
CETV01141958
193463
Alphaproteobacteria
CCT
Arg
>WENV170379721
CETV01198357
284697
Alphaproteobacteria
GAA
Phe
>WENV170379655
CETV01174166
400518
Alphaproteobacteria
GAA
Phe
>WENV170378409
CETV01019450
288727
Alphaproteobacteria
>WENV170379978
CETV01264947
400516
Alphaproteobacteria
TTG
Gln
>WENV170379700
CETV01192037
403836
Alphaproteobacteria
>WENV170379633
CETV01162619
178734
Alphaproteobacteria
TGG
Pro
>WENV170379061
CETV01086064
408543
Alphaproteobacteria
GAC
Val
>WENV170379658
CETV01175248
178327
Alphaproteobacteria
GTG
His
>WENV170379439
CETV01128945
181950
Alphaproteobacteria
TCT
Arg
>WENV170379472
CETV01131415
178331
Alphaproteobacteria
CCG
Arg
>WENV170379224
CETV01105045
121250
Alphaproteobacteria
TAG
Leu
>WENV170379632
CETV01162619
178733
Alphaproteobacteria
CAT
Met
>WENV170379891
CETV01249451
22052
Alphaproteobacteria
GGA
Ser
>WENV170379613
CETV01149304
73986
Alphaproteobacteria
CAG
Leu
>WENV170379490
CETV01132788
280860
Alphaproteobacteria
TAC
Val
>WENV170379044
CETV01083624
73167
Alphaproteobacteria
GAG
Leu
>WENV170379799
CETV01222444
400544
Alphaproteobacteria
GGT
Thr
>WENV170379312
CETV01115874
400517
Alphaproteobacteria
GGT
Thr
>WENV170378863
CETV01058890
282981
Alphaproteobacteria
CCA
Trp
>WENV170379831
CETV01230451
400106
Alphaproteobacteria
GTT
Asn
>WENV170378449
CETV01022424
176633
Alphaproteobacteria
GAT
Ile
>WENV170379741
CETV01203842
480900
Alphaproteobacteria
GCA
Cys
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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