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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
30 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV170387575
CETY01450299
503359
Gammaproteobacteria
GCA
Cys
>WENV170384741
CETY01011021
20664
Gammaproteobacteria
GCT
Ser
>WENV170386827
CETY01197579
355878
Gammaproteobacteria
GGT
Thr
>WENV170387638
CETY01454797
208313
Gammaproteobacteria
GAC
Val
>WENV170385935
CETY01117122
328691
Gammaproteobacteria
GGT
Thr
>WENV170386831
CETY01197625
289747
Gammaproteobacteria
GTG
His
>WENV170385496
CETY01072723
176796
Gammaproteobacteria
GGG
Pro
>WENV170386808
CETY01197243
20618
Gammaproteobacteria
GGA
Ser
>WENV170385846
CETY01107958
284131
Gammaproteobacteria
GCC
Gly
>WENV170385848
CETY01107958
284131
Gammaproteobacteria
GCC
Gly
>WENV170385929
CETY01116962
311084
Gammaproteobacteria
GCC
Gly
>WENV170386873
CETY01198134
178471
Gammaproteobacteria
GTT
Asn
>WENV170386176
CETY01140373
292006
Gammaproteobacteria
TGC
Ala
>WENV170387600
CETY01452499
56104
Gammaproteobacteria
GGA
Ser
>WENV170385930
CETY01116962
480629
Gammaproteobacteria
GCA
Cys
>WENV170387144
CETY01336171
178168
Gammaproteobacteria
ACG
Arg
>WENV170386589
CETY01183726
176545
Gammaproteobacteria
CAT
Met
>WENV170384743
CETY01011021
232119
Gammaproteobacteria
ACG
Arg
>WENV170384742
CETY01011021
232119
Gammaproteobacteria
ACG
Arg
>WENV170386870
CETY01198105
74048
Gammaproteobacteria
CAA
Leu
>WENV170385691
CETY01093789
334421
Gammaproteobacteria
TGT
Thr
>WENV170385501
CETY01073132
177028
Gammaproteobacteria
CAT
Met
>WENV170386860
CETY01198055
180680
Gammaproteobacteria
GAC
Val
>WENV170386859
CETY01198055
285547
Gammaproteobacteria
TTG
Gln
>WENV170385306
CETY01057186
340790
Gammaproteobacteria
TGT
Thr
>WENV170387296
CETY01389131
480548
Gammaproteobacteria
GCA
Cys
>WENV170387133
CETY01331958
282018
Gammaproteobacteria
TGT
Thr
>WENV170385369
CETY01064156
186591
Gammaproteobacteria
ACG
Arg
>WENV170385303
CETY01056748
282902
Gammaproteobacteria
TGT
Thr
>WENV170387539
CETY01447042
180679
Gammaproteobacteria
CCA
Trp
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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