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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
46 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV170468279
CEVF01021731
140963
Alphaproteobacteria
>WENV170469338
CEVF01107345
140963
Alphaproteobacteria
>WENV170468082
CEVF01009355
178510
Alphaproteobacteria
ACG
Arg
>WENV170468903
CEVF01070399
180022
Alphaproteobacteria
ACG
Arg
>WENV170470564
CEVF01299806
141247
Alphaproteobacteria
CAA
Leu
>WENV170469878
CEVF01147672
411290
Alphaproteobacteria
CAC
Val
>WENV170468186
CEVF01016593
73523
Alphaproteobacteria
CAG
Leu
>WENV170468871
CEVF01067786
201940
Alphaproteobacteria
CAT
Met
>WENV170468940
CEVF01072304
201940
Alphaproteobacteria
CAT
Met
>WENV170469427
CEVF01114234
201940
Alphaproteobacteria
CAT
Met
>WENV170469562
CEVF01125172
201940
Alphaproteobacteria
CAT
Met
>WENV170468006
CEVF01004309
178733
Alphaproteobacteria
CAT
Met
>WENV170468863
CEVF01066624
282981
Alphaproteobacteria
CCA
Trp
>WENV170470378
CEVF01256887
296763
Alphaproteobacteria
CCA
Trp
>WENV170468915
CEVF01070853
183628
Alphaproteobacteria
CCG
Arg
>WENV170468111
CEVF01010810
178505
Alphaproteobacteria
CCG
Arg
>WENV170468537
CEVF01041335
178736
Alphaproteobacteria
CCT
Arg
>WENV170470601
CEVF01304703
481098
Alphaproteobacteria
CTG
Gln
>WENV170470014
CEVF01152936
400518
Alphaproteobacteria
GAA
Phe
>WENV170469580
CEVF01126409
399480
Alphaproteobacteria
GAA
Phe
>WENV170468065
CEVF01008037
400848
Alphaproteobacteria
GAC
Val
>WENV170468332
CEVF01025523
408543
Alphaproteobacteria
GAC
Val
>WENV170469954
CEVF01150936
78115
Alphaproteobacteria
GAG
Leu
>WENV170468834
CEVF01065145
78115
Alphaproteobacteria
GAG
Leu
>WENV170468022
CEVF01005115
73167
Alphaproteobacteria
GAG
Leu
>WENV170468617
CEVF01048094
480900
Alphaproteobacteria
GCA
Cys
>WENV170470030
CEVF01153458
415482
Alphaproteobacteria
GCC
Gly
>WENV170469222
CEVF01095050
400693
Alphaproteobacteria
GCC
Gly
>WENV170469251
CEVF01098042
29495
Alphaproteobacteria
GCT
Ser
>WENV170469122
CEVF01087139
29495
Alphaproteobacteria
GCT
Ser
>WENV170468752
CEVF01057237
29702
Alphaproteobacteria
GGA
Ser
>WENV170469596
CEVF01128088
178815
Alphaproteobacteria
GGG
Pro
>WENV170468176
CEVF01015521
400544
Alphaproteobacteria
GGT
Thr
>WENV170468206
CEVF01017450
400517
Alphaproteobacteria
GGT
Thr
>WENV170469221
CEVF01095050
400029
Alphaproteobacteria
GGT
Thr
>WENV170470526
CEVF01291910
102146
Alphaproteobacteria
GTA
Tyr
>WENV170468846
CEVF01065846
398994
Alphaproteobacteria
GTT
Asn
>WENV170470597
CEVF01304143
121250
Alphaproteobacteria
TAG
Leu
>WENV170469734
CEVF01138231
488318
Alphaproteobacteria
TCC
Gly
>WENV170469708
CEVF01136418
190609
Alphaproteobacteria
TCT
Arg
>WENV170469756
CEVF01139765
33571
Alphaproteobacteria
TGA
Ser
>WENV170469686
CEVF01134677
290043
Alphaproteobacteria
TGC
Ala
>WENV170470571
CEVF01300643
179390
Alphaproteobacteria
TGG
Pro
>WENV170468007
CEVF01004309
178734
Alphaproteobacteria
TGG
Pro
>WENV170468817
CEVF01062959
400384
Alphaproteobacteria
TTC
Glu
>WENV170468307
CEVF01024035
400516
Alphaproteobacteria
TTG
Gln
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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