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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
45 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV170470235
CEVF01201145
297858
Gammaproteobacteria
TGC
Ala
>WENV170470546
CEVF01295589
297858
Gammaproteobacteria
TGC
Ala
>WENV170468215
CEVF01018242
179284
Gammaproteobacteria
CAT
Met
>WENV170470265
CEVF01220485
20273
Gammaproteobacteria
TGA
Ser
>WENV170468658
CEVF01050838
178175
Gammaproteobacteria
ACG
Arg
>WENV170468302
CEVF01023519
120827
Gammaproteobacteria
GAG
Leu
>WENV170468923
CEVF01071216
29834
Gammaproteobacteria
GCT
Ser
>WENV170468334
CEVF01025586
292194
Gammaproteobacteria
GGT
Thr
>WENV170468326
CEVF01025244
401696
Gammaproteobacteria
TTG
Gln
>WENV170468262
CEVF01020317
178025
Gammaproteobacteria
GAC
Val
>WENV170469997
CEVF01152265
281282
Gammaproteobacteria
TTC
Glu
>WENV170468509
CEVF01038811
74240
Gammaproteobacteria
CAA
Leu
>WENV170468071
CEVF01008396
292006
Gammaproteobacteria
TGC
Ala
>WENV170468716
CEVF01054370
480516
Gammaproteobacteria
GCA
Cys
>WENV170470610
CEVF01305544
184459
Gammaproteobacteria
CAT
Met
>WENV170468163
CEVF01014527
197498
Gammaproteobacteria
TGG
Pro
>WENV170468165
CEVF01014527
291402
Gammaproteobacteria
GTG
His
>WENV170468622
CEVF01048666
303413
Gammaproteobacteria
GGT
Thr
>WENV170469380
CEVF01110637
481678
Gammaproteobacteria
GCA
Cys
>WENV170468950
CEVF01072781
306288
Gammaproteobacteria
GCC
Gly
>WENV170468531
CEVF01040670
177028
Gammaproteobacteria
CAT
Met
>WENV170468879
CEVF01068369
488965
Gammaproteobacteria
GCA
Cys
>WENV170468133
CEVF01012543
488965
Gammaproteobacteria
GCA
Cys
>WENV170469140
CEVF01088995
205778
Gammaproteobacteria
GTC
Asp
>WENV170468057
CEVF01007668
180680
Gammaproteobacteria
GAC
Val
>WENV170467999
CEVF01003584
180680
Gammaproteobacteria
GAC
Val
>WENV170468070
CEVF01008396
176301
Gammaproteobacteria
GAT
Ile
>WENV170469468
CEVF01118156
301005
Gammaproteobacteria
TGC
Ala
>WENV170468850
CEVF01065976
301005
Gammaproteobacteria
TGC
Ala
>WENV170470371
CEVF01255246
180678
Gammaproteobacteria
CCG
Arg
>WENV170469184
CEVF01092387
176665
Gammaproteobacteria
CGG
Pro
>WENV170469174
CEVF01091617
481314
Gammaproteobacteria
GCA
Cys
>WENV170469568
CEVF01125706
201377
Gammaproteobacteria
TGG
Pro
>WENV170468831
CEVF01064974
281283
Gammaproteobacteria
GTG
His
>WENV170468496
CEVF01037527
179710
Gammaproteobacteria
GAC
Val
>WENV170468411
CEVF01032628
186591
Gammaproteobacteria
ACG
Arg
>WENV170468152
CEVF01013993
186591
Gammaproteobacteria
ACG
Arg
>WENV170468151
CEVF01013993
186591
Gammaproteobacteria
ACG
Arg
>WENV170469526
CEVF01121795
282902
Gammaproteobacteria
TGT
Thr
>WENV170468287
CEVF01022044
285826
Gammaproteobacteria
GGT
Thr
>WENV170469474
CEVF01118224
180679
Gammaproteobacteria
CCA
Trp
>WENV170468801
CEVF01061043
180679
Gammaproteobacteria
CCA
Trp
>WENV170468280
CEVF01021754
180679
Gammaproteobacteria
CCA
Trp
>WENV170467974
CEVF01002291
180679
Gammaproteobacteria
CCA
Trp
>WENV170469748
CEVF01139264
283486
Gammaproteobacteria
TGT
Thr
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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