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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
27 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV170564867
CZPY01000012
399001
Alphaproteobacteria
GAC
Val
>WENV170564874
CZPY01000014
29596
Alphaproteobacteria
GCT
Ser
>WENV170564868
CZPY01000012
284277
Alphaproteobacteria
CGC
Ala
>WENV170564884
CZPY01000034
75222
Alphaproteobacteria
GAG
Leu
>WENV170564858
CZPY01000009
100292
Alphaproteobacteria
TAA
Leu
>WENV170564862
CZPY01000009
140932
Alphaproteobacteria
>WENV170564860
CZPY01000009
197061
Alphaproteobacteria
CCT
Arg
>WENV170564880
CZPY01000027
200168
Alphaproteobacteria
CCG
Arg
>WENV170564877
CZPY01000016
324019
Alphaproteobacteria
TGC
Ala
>WENV170564892
CZPY01000042
324019
Alphaproteobacteria
TGC
Ala
>WENV170564853
CZPY01000004
400069
Alphaproteobacteria
CAC
Val
>WENV170564847
CZPY01000003
398998
Alphaproteobacteria
TTG
Gln
>WENV170564850
CZPY01000004
156060
Alphaproteobacteria
GGG
Pro
>WENV170564863
CZPY01000009
179419
Alphaproteobacteria
TGG
Pro
>WENV170564857
CZPY01000007
29408
Alphaproteobacteria
CGA
Ser
>WENV170564845
CZPY01000001
282658
Alphaproteobacteria
CGT
Thr
>WENV170564882
CZPY01000030
176490
Alphaproteobacteria
CAT
Met
>WENV170564873
CZPY01000014
488318
Alphaproteobacteria
TCC
Gly
>WENV170564854
CZPY01000006
398994
Alphaproteobacteria
GTT
Asn
>WENV170564866
CZPY01000012
480392
Alphaproteobacteria
GCA
Cys
>WENV170564852
CZPY01000004
399000
Alphaproteobacteria
TTC
Glu
>WENV170564851
CZPY01000004
399000
Alphaproteobacteria
TTC
Glu
>WENV170564889
CZPY01000034
413432
Alphaproteobacteria
GGT
Thr
>WENV170564865
CZPY01000012
428327
Alphaproteobacteria
GCC
Gly
>WENV170564883
CZPY01000030
29598
Alphaproteobacteria
GGA
Ser
>WENV170564875
CZPY01000015
308123
Alphaproteobacteria
CCA
Trp
>WENV170564861
CZPY01000009
332802
Alphaproteobacteria
GGC
Ala
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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