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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
24 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV180004019
FLRQ01008467
482907
Bacteroidota
CTG
Gln
>WENV180004069
FLRQ01028636
481329
Bacteroidota
>WENV180004149
FLRQ01087423
482909
Bacteroidota
TTG
Gln
>WENV180004042
FLRQ01015685
400949
Bacteroidota
CCT
Arg
>WENV180004016
FLRQ01006579
185159
Bacteroidota
TCT
Arg
>WENV180004104
FLRQ01052788
120171
Bacteroidota
GTA
Tyr
>WENV180004070
FLRQ01028987
157146
Bacteroidota
TAC
Val
>WENV180004151
FLRQ01087795
178571
Bacteroidota
GTT
Asn
>WENV180004003
FLRQ01004367
290467
Bacteroidota
TTT
Lys
>WENV180003998
FLRQ01003381
75001
Bacteroidota
CAA
Leu
>WENV180004119
FLRQ01062785
175886
Bacteroidota
GGC
Ala
>WENV180004028
FLRQ01011589
175886
Bacteroidota
GGC
Ala
>WENV180004022
FLRQ01009077
46648
Bacteroidota
TAA
Leu
>WENV180003978
FLRQ01000496
404661
Bacteroidota
GTG
His
>WENV180004018
FLRQ01008213
280478
Bacteroidota
GCC
Gly
>WENV180003985
FLRQ01000796
119584
Bacteroidota
TAG
Leu
>WENV180003976
FLRQ01000390
290466
Bacteroidota
CCA
Trp
>WENV180003990
FLRQ01001287
331443
Bacteroidota
CGT
Thr
>WENV180003997
FLRQ01002944
482908
Bacteroidota
GCA
Cys
>WENV180004032
FLRQ01012876
185161
Bacteroidota
GTT
Asn
>WENV180004000
FLRQ01003815
30780
Bacteroidota
GCT
Ser
>WENV180003996
FLRQ01002540
416636
Bacteroidota
TTC
Glu
>WENV180004082
FLRQ01038682
481045
Bacteroidota
CCC
Gly
>WENV180003980
FLRQ01000520
290468
Bacteroidota
CTT
Lys
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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