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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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Download
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
10 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV170574081
FLYM01003799
23966
Gammaproteobacteria
CGA
Ser
>WENV170574225
FLYM01015467
306825
Gammaproteobacteria
GCC
Gly
>WENV170574146
FLYM01008808
184451
Gammaproteobacteria
CAT
Met
>WENV170574464
FLYM01041370
192143
Gammaproteobacteria
GGG
Pro
>WENV170574249
FLYM01017697
371167
Gammaproteobacteria
CGC
Ala
>WENV170574287
FLYM01022215
480983
Gammaproteobacteria
CCC
Gly
>WENV170574158
FLYM01009885
123335
Gammaproteobacteria
GAG
Leu
>WENV170574305
FLYM01024714
178442
Gammaproteobacteria
CCT
Arg
>WENV170574468
FLYM01042443
178324
Gammaproteobacteria
CCT
Arg
>WENV170574381
FLYM01031792
139332
Gammaproteobacteria
CAG
Leu
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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