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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
37 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV180023352
FTHV01001067
284070
Actinomycetota
CTC
Glu
>WENV180023353
FTHV01001067
284070
Actinomycetota
CTC
Glu
>WENV180023329
FTHV01000258
178396
Actinomycetota
GAT
Ile
>WENV180023342
FTHV01000712
281115
Actinomycetota
>WENV180023343
FTHV01000712
281115
Actinomycetota
>WENV180023374
FTHV01002303
281120
Actinomycetota
TTC
Glu
>WENV180023323
FTHV01000047
399113
Actinomycetota
GAC
Val
>WENV180023324
FTHV01000047
399113
Actinomycetota
GAC
Val
>WENV180023338
FTHV01000538
56126
Actinomycetota
GAG
Leu
>WENV180023394
FTHV01010510
56126
Actinomycetota
GAG
Leu
>WENV180023331
FTHV01000284
73094
Actinomycetota
CAG
Leu
>WENV180023336
FTHV01000472
178511
Actinomycetota
TGT
Thr
>WENV180023371
FTHV01001852
183945
Actinomycetota
GTC
Asp
>WENV180023375
FTHV01002303
183945
Actinomycetota
GTC
Asp
>WENV180023322
FTHV01000021
183981
Actinomycetota
CAT
Met
>WENV180023328
FTHV01000221
183981
Actinomycetota
CAT
Met
>WENV180023355
FTHV01001137
183981
Actinomycetota
CAT
Met
>WENV180023365
FTHV01001624
183981
Actinomycetota
CAT
Met
>WENV180023369
FTHV01001761
183981
Actinomycetota
CAT
Met
>WENV180023403
FTHV01029174
183981
Actinomycetota
CAT
Met
>WENV180023378
FTHV01003181
176344
Actinomycetota
CGT
Thr
>WENV180023335
FTHV01000411
180963
Actinomycetota
CTT
Lys
>WENV180023340
FTHV01000561
180963
Actinomycetota
CTT
Lys
>WENV180023341
FTHV01000561
180963
Actinomycetota
CTT
Lys
>WENV180023372
FTHV01001893
179086
Actinomycetota
CGC
Ala
>WENV180023389
FTHV01006243
290573
Actinomycetota
CAT
Met
>WENV180023351
FTHV01001067
400663
Actinomycetota
CTG
Gln
>WENV180023366
FTHV01001690
5755
Actinomycetota
GCT
Ser
>WENV180023357
FTHV01001182
183946
Actinomycetota
TGG
Pro
>WENV180023344
FTHV01000791
281031
Actinomycetota
GGT
Thr
>WENV180023388
FTHV01006243
281031
Actinomycetota
GGT
Thr
>WENV180023383
FTHV01004174
481396
Actinomycetota
CCC
Gly
>WENV180023379
FTHV01003379
399126
Actinomycetota
TAC
Val
>WENV180023421
FTHV01127296
20227
Actinomycetota
TGA
Ser
>WENV180023327
FTHV01000202
289100
Actinomycetota
ACG
Arg
>WENV180023367
FTHV01001690
289100
Actinomycetota
ACG
Arg
>WENV180023368
FTHV01001690
289100
Actinomycetota
ACG
Arg
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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