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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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Download
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
7 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV180028170
FTJA01001366
119073
Alphaproteobacteria
TAG
Leu
>WENV180028457
FTJA01594535
75222
Alphaproteobacteria
GAG
Leu
>WENV180028184
FTJA01002246
78800
Alphaproteobacteria
CAG
Leu
>WENV180028341
FTJA01115510
399340
Alphaproteobacteria
GTT
Asn
>WENV180028416
FTJA01241908
481074
Alphaproteobacteria
TCC
Gly
>WENV180028201
FTJA01003181
402067
Alphaproteobacteria
GCC
Gly
>WENV180028297
FTJA01058271
331860
Alphaproteobacteria
CCA
Trp
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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