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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
18 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV170679925
LFCJ01001608
487002
Gammaproteobacteria
GCA
Cys
>WENV170679774
LFCJ01000385
178539
Gammaproteobacteria
GAC
Val
>WENV170679775
LFCJ01000385
178539
Gammaproteobacteria
GAC
Val
>WENV170680564
LFCJ01014980
74766
Gammaproteobacteria
CAG
Leu
>WENV170679926
LFCJ01001608
73781
Gammaproteobacteria
TAA
Leu
>WENV170679831
LFCJ01000690
73828
Gammaproteobacteria
CAG
Leu
>WENV170679832
LFCJ01000690
73828
Gammaproteobacteria
CAG
Leu
>WENV170680041
LFCJ01002899
284693
Gammaproteobacteria
TTC
Glu
>WENV170680043
LFCJ01002899
284693
Gammaproteobacteria
TTC
Glu
>WENV170679604
LFCJ01000070
190706
Gammaproteobacteria
ACG
Arg
>WENV170679605
LFCJ01000070
190706
Gammaproteobacteria
ACG
Arg
>WENV170679834
LFCJ01000728
74339
Gammaproteobacteria
GAG
Leu
>WENV170679830
LFCJ01000690
73827
Gammaproteobacteria
CAG
Leu
>WENV170679693
LFCJ01000149
481325
Gammaproteobacteria
TCC
Gly
>WENV170680470
LFCJ01012123
207735
Gammaproteobacteria
GAC
Val
>WENV170680037
LFCJ01002899
176518
Gammaproteobacteria
CAT
Met
>WENV170680044
LFCJ01002899
176518
Gammaproteobacteria
CAT
Met
>WENV170680302
LFCJ01007564
400928
Gammaproteobacteria
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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