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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
33 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV170744118
LULW01025766
360947
Alphaproteobacteria
TTT
Lys
>WENV170743389
LULW01000001
296698
Alphaproteobacteria
CGC
Ala
>WENV170743537
LULW01000371
481048
Alphaproteobacteria
GCA
Cys
>WENV170744117
LULW01025494
424450
Alphaproteobacteria
GGT
Thr
>WENV170743376
LULW01000001
193463
Alphaproteobacteria
CCT
Arg
>WENV170744190
LULW01035534
400387
Alphaproteobacteria
GGT
Thr
>WENV170743404
LULW01000002
20437
Alphaproteobacteria
GGA
Ser
>WENV170743392
LULW01000001
201940
Alphaproteobacteria
CAT
Met
>WENV170743408
LULW01000005
481802
Alphaproteobacteria
TCC
Gly
>WENV170743455
LULW01000104
481073
Alphaproteobacteria
CTG
Gln
>WENV170743934
LULW01009720
197241
Alphaproteobacteria
GGG
Pro
>WENV170744125
LULW01026406
400384
Alphaproteobacteria
TTC
Glu
>WENV170743396
LULW01000001
282977
Alphaproteobacteria
CAT
Met
>WENV170743410
LULW01000007
427571
Alphaproteobacteria
GCC
Gly
>WENV170743394
LULW01000001
192131
Alphaproteobacteria
GTC
Asp
>WENV170743450
LULW01000090
481074
Alphaproteobacteria
TCC
Gly
>WENV170744056
LULW01018335
435083
Alphaproteobacteria
>WENV170743473
LULW01000145
118247
Alphaproteobacteria
CAA
Leu
>WENV170743468
LULW01000132
29655
Alphaproteobacteria
TGA
Ser
>WENV170743407
LULW01000005
400517
Alphaproteobacteria
GGT
Thr
>WENV170743447
LULW01000078
286018
Alphaproteobacteria
CCA
Trp
>WENV170744129
LULW01026571
145377
Alphaproteobacteria
>WENV170743909
LULW01008244
234327
Alphaproteobacteria
GAT
Ile
>WENV170744183
LULW01034238
453762
Alphaproteobacteria
CAC
Val
>WENV170743998
LULW01014137
400029
Alphaproteobacteria
GGT
Thr
>WENV170743466
LULW01000129
422170
Alphaproteobacteria
GGT
Thr
>WENV170744141
LULW01027645
400515
Alphaproteobacteria
GAC
Val
>WENV170743412
LULW01000007
282981
Alphaproteobacteria
CCA
Trp
>WENV170744162
LULW01031101
353624
Alphaproteobacteria
CCA
Trp
>WENV170743417
LULW01000012
480900
Alphaproteobacteria
GCA
Cys
>WENV170743437
LULW01000046
178576
Alphaproteobacteria
ACG
Arg
>WENV170743401
LULW01000002
118150
Alphaproteobacteria
TAG
Leu
>WENV170743620
LULW01000977
118150
Alphaproteobacteria
TAG
Leu
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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