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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
31 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV170768170
LXNH01013233
399001
Alphaproteobacteria
GAC
Val
>WENV170767807
LXNH01006197
201940
Alphaproteobacteria
CAT
Met
>WENV170768451
LXNH01020105
201940
Alphaproteobacteria
CAT
Met
>WENV170768736
LXNH01028856
201940
Alphaproteobacteria
CAT
Met
>WENV170769199
LXNH01045638
201940
Alphaproteobacteria
CAT
Met
>WENV170769825
LXNH01071997
201940
Alphaproteobacteria
CAT
Met
>WENV170769826
LXNH01072015
201940
Alphaproteobacteria
CAT
Met
>WENV170770579
LXNH01112955
201940
Alphaproteobacteria
CAT
Met
>WENV170767289
LXNH01000370
73490
Alphaproteobacteria
GAG
Leu
>WENV170768880
LXNH01033519
314617
Alphaproteobacteria
TAC
Val
>WENV170769722
LXNH01066696
509917
Alphaproteobacteria
TCC
Gly
>WENV170769961
LXNH01078319
75222
Alphaproteobacteria
GAG
Leu
>WENV170769615
LXNH01062267
281659
Alphaproteobacteria
TGC
Ala
>WENV170770582
LXNH01113355
281659
Alphaproteobacteria
TGC
Ala
>WENV170769813
LXNH01071513
400384
Alphaproteobacteria
TTC
Glu
>WENV170767584
LXNH01003180
234690
Alphaproteobacteria
CGG
Pro
>WENV170769907
LXNH01075903
192131
Alphaproteobacteria
GTC
Asp
>WENV170768347
LXNH01017435
436046
Alphaproteobacteria
GAC
Val
>WENV170769598
LXNH01061445
317915
Alphaproteobacteria
GAA
Phe
>WENV170768450
LXNH01019942
435083
Alphaproteobacteria
>WENV170768336
LXNH01017077
400544
Alphaproteobacteria
GGT
Thr
>WENV170769968
LXNH01078663
229804
Alphaproteobacteria
GTC
Asp
>WENV170767867
LXNH01007180
229804
Alphaproteobacteria
GTC
Asp
>WENV170768699
LXNH01027469
427428
Alphaproteobacteria
GCC
Gly
>WENV170768244
LXNH01014915
228432
Alphaproteobacteria
TGG
Pro
>WENV170769470
LXNH01055685
228432
Alphaproteobacteria
TGG
Pro
>WENV170769486
LXNH01056170
228432
Alphaproteobacteria
TGG
Pro
>WENV170767419
LXNH01001412
398994
Alphaproteobacteria
GTT
Asn
>WENV170770277
LXNH01096069
398994
Alphaproteobacteria
GTT
Asn
>WENV170770631
LXNH01115875
398994
Alphaproteobacteria
GTT
Asn
>WENV170768094
LXNH01011830
29495
Alphaproteobacteria
GCT
Ser
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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