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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
25 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV170947647
MEHZ010822806
281518
Betaproteobacteria
CAT
Met
>WENV170947909
MEHZ010995972
118421
Betaproteobacteria
TAG
Leu
>WENV170948360
MEHZ011161185
281431
Betaproteobacteria
GTT
Asn
>WENV170948821
MEHZ011288299
186768
Betaproteobacteria
>WENV170948932
MEHZ011313274
286629
Betaproteobacteria
CCA
Trp
>WENV170949589
MEHZ011434477
284934
Betaproteobacteria
TGT
Thr
>WENV170949591
MEHZ011434485
284934
Betaproteobacteria
TGT
Thr
>WENV170949795
MEHZ011454099
284297
Betaproteobacteria
TGT
Thr
>WENV170949856
MEHZ011458206
340615
Betaproteobacteria
TGC
Ala
>WENV170949893
MEHZ011462591
286629
Betaproteobacteria
CCA
Trp
>WENV170950471
MEHZ011498590
284934
Betaproteobacteria
TGT
Thr
>WENV170950793
MEHZ011517824
284297
Betaproteobacteria
TGT
Thr
>WENV170950996
MEHZ011530834
118799
Betaproteobacteria
GAG
Leu
>WENV170951141
MEHZ011538812
399392
Betaproteobacteria
GGT
Thr
>WENV170951704
MEHZ011565276
496730
Betaproteobacteria
GCA
Cys
>WENV170951781
MEHZ011569697
286629
Betaproteobacteria
CCA
Trp
>WENV170951875
MEHZ011574294
118799
Betaproteobacteria
GAG
Leu
>WENV170952414
MEHZ011596508
340615
Betaproteobacteria
TGC
Ala
>WENV170952513
MEHZ011601428
195882
Betaproteobacteria
TTG
Gln
>WENV170952545
MEHZ011603331
284934
Betaproteobacteria
TGT
Thr
>WENV170952735
MEHZ011611936
340615
Betaproteobacteria
TGC
Ala
>WENV170952831
MEHZ011616732
284934
Betaproteobacteria
TGT
Thr
>WENV170953055
MEHZ011626561
284934
Betaproteobacteria
TGT
Thr
>WENV170953728
MEHZ011660931
229876
Betaproteobacteria
GGG
Pro
>WENV170953884
MEHZ011668676
499230
Betaproteobacteria
TCC
Gly
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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