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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
80 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV170951433
MEHZ011552822
297858
Gammaproteobacteria
TGC
Ala
>WENV170953155
MEHZ011631501
297858
Gammaproteobacteria
TGC
Ala
>WENV170953377
MEHZ011641947
297858
Gammaproteobacteria
TGC
Ala
>WENV170953669
MEHZ011658386
297858
Gammaproteobacteria
TGC
Ala
>WENV170948782
MEHZ011279542
480941
Gammaproteobacteria
TCC
Gly
>WENV170952839
MEHZ011617375
480941
Gammaproteobacteria
TCC
Gly
>WENV170951137
MEHZ011538693
184446
Gammaproteobacteria
GAC
Val
>WENV170949946
MEHZ011465926
314350
Gammaproteobacteria
CCA
Trp
>WENV170950925
MEHZ011527929
314350
Gammaproteobacteria
CCA
Trp
>WENV170952940
MEHZ011621531
314350
Gammaproteobacteria
CCA
Trp
>WENV170953418
MEHZ011644345
176796
Gammaproteobacteria
GGG
Pro
>WENV170952744
MEHZ011612569
191061
Gammaproteobacteria
ACG
Arg
>WENV170950010
MEHZ011470428
191061
Gammaproteobacteria
ACG
Arg
>WENV170950892
MEHZ011524719
185999
Gammaproteobacteria
CCG
Arg
>WENV170950727
MEHZ011513934
185999
Gammaproteobacteria
CCG
Arg
>WENV170953200
MEHZ011633523
311084
Gammaproteobacteria
GCC
Gly
>WENV170951319
MEHZ011548124
229289
Gammaproteobacteria
TGG
Pro
>WENV170950536
MEHZ011502496
229289
Gammaproteobacteria
TGG
Pro
>WENV170950610
MEHZ011506036
229289
Gammaproteobacteria
TGG
Pro
>WENV170950767
MEHZ011516421
229289
Gammaproteobacteria
TGG
Pro
>WENV170950818
MEHZ011520124
229289
Gammaproteobacteria
TGG
Pro
>WENV170950915
MEHZ011526937
229289
Gammaproteobacteria
TGG
Pro
>WENV170951170
MEHZ011539845
229289
Gammaproteobacteria
TGG
Pro
>WENV170947575
MEHZ010759216
483085
Gammaproteobacteria
GCA
Cys
>WENV170950712
MEHZ011512831
296670
Gammaproteobacteria
TGT
Thr
>WENV170950160
MEHZ011481240
292006
Gammaproteobacteria
TGC
Ala
>WENV170953201
MEHZ011633523
480629
Gammaproteobacteria
GCA
Cys
>WENV170948371
MEHZ011166706
402281
Gammaproteobacteria
GCC
Gly
>WENV170952864
MEHZ011618523
291402
Gammaproteobacteria
GTG
His
>WENV170948363
MEHZ011162127
281668
Gammaproteobacteria
TTT
Lys
>WENV170951419
MEHZ011552183
481325
Gammaproteobacteria
TCC
Gly
>WENV170949944
MEHZ011465926
481325
Gammaproteobacteria
TCC
Gly
>WENV170949853
MEHZ011457839
181365
Gammaproteobacteria
CAT
Met
>WENV170952345
MEHZ011593657
181365
Gammaproteobacteria
CAT
Met
>WENV170947901
MEHZ010993034
176610
Gammaproteobacteria
ACG
Arg
>WENV170951920
MEHZ011576646
335783
Gammaproteobacteria
GTT
Asn
>WENV170951919
MEHZ011576646
335783
Gammaproteobacteria
GTT
Asn
>WENV170950550
MEHZ011503015
335783
Gammaproteobacteria
GTT
Asn
>WENV170948603
MEHZ011236526
334421
Gammaproteobacteria
TGT
Thr
>WENV170951172
MEHZ011540016
177028
Gammaproteobacteria
CAT
Met
>WENV170950705
MEHZ011512693
177028
Gammaproteobacteria
CAT
Met
>WENV170949668
MEHZ011443242
176301
Gammaproteobacteria
GAT
Ile
>WENV170950159
MEHZ011481240
176301
Gammaproteobacteria
GAT
Ile
>WENV170950807
MEHZ011518795
176301
Gammaproteobacteria
GAT
Ile
>WENV170951854
MEHZ011572932
176301
Gammaproteobacteria
GAT
Ile
>WENV170952305
MEHZ011592116
176301
Gammaproteobacteria
GAT
Ile
>WENV170952869
MEHZ011618633
176301
Gammaproteobacteria
GAT
Ile
>WENV170953363
MEHZ011641552
176301
Gammaproteobacteria
GAT
Ile
>WENV170953798
MEHZ011664272
176301
Gammaproteobacteria
GAT
Ile
>WENV170953852
MEHZ011667171
176301
Gammaproteobacteria
GAT
Ile
>WENV170953772
MEHZ011663425
340790
Gammaproteobacteria
TGT
Thr
>WENV170953730
MEHZ011661325
340790
Gammaproteobacteria
TGT
Thr
>WENV170953724
MEHZ011660913
340790
Gammaproteobacteria
TGT
Thr
>WENV170953340
MEHZ011640689
340790
Gammaproteobacteria
TGT
Thr
>WENV170953271
MEHZ011637116
201377
Gammaproteobacteria
TGG
Pro
>WENV170952110
MEHZ011583442
281791
Gammaproteobacteria
GTG
His
>WENV170952049
MEHZ011581805
281791
Gammaproteobacteria
GTG
His
>WENV170951869
MEHZ011573926
281791
Gammaproteobacteria
GTG
His
>WENV170949840
MEHZ011457132
281791
Gammaproteobacteria
GTG
His
>WENV170953526
MEHZ011650684
181277
Gammaproteobacteria
ACG
Arg
>WENV170953401
MEHZ011643560
181277
Gammaproteobacteria
ACG
Arg
>WENV170953292
MEHZ011638839
181277
Gammaproteobacteria
ACG
Arg
>WENV170953156
MEHZ011631536
181277
Gammaproteobacteria
ACG
Arg
>WENV170950316
MEHZ011490453
181277
Gammaproteobacteria
ACG
Arg
>WENV170951798
MEHZ011570582
282018
Gammaproteobacteria
TGT
Thr
>WENV170953309
MEHZ011639401
300318
Gammaproteobacteria
GGC
Ala
>WENV170950435
MEHZ011496815
300318
Gammaproteobacteria
GGC
Ala
>WENV170953660
MEHZ011658044
286980
Gammaproteobacteria
TTT
Lys
>WENV170953619
MEHZ011655884
286980
Gammaproteobacteria
TTT
Lys
>WENV170953312
MEHZ011639513
286980
Gammaproteobacteria
TTT
Lys
>WENV170949028
MEHZ011341510
141076
Gammaproteobacteria
GTA
Tyr
>WENV170948738
MEHZ011271767
186591
Gammaproteobacteria
ACG
Arg
>WENV170953702
MEHZ011660321
282902
Gammaproteobacteria
TGT
Thr
>WENV170952837
MEHZ011617375
282902
Gammaproteobacteria
TGT
Thr
>WENV170952280
MEHZ011591271
282902
Gammaproteobacteria
TGT
Thr
>WENV170952205
MEHZ011588520
282902
Gammaproteobacteria
TGT
Thr
>WENV170950740
MEHZ011514845
282902
Gammaproteobacteria
TGT
Thr
>WENV170950015
MEHZ011470721
282902
Gammaproteobacteria
TGT
Thr
>WENV170950131
MEHZ011479437
283486
Gammaproteobacteria
TGT
Thr
>WENV170949486
MEHZ011424571
283486
Gammaproteobacteria
TGT
Thr
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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