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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
20 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV180074456
MPMA02145300
178164
Gammaproteobacteria
GAT
Ile
>WENV180072086
MPMA02000320
311084
Gammaproteobacteria
GCC
Gly
>WENV180074621
MPMA02155566
311084
Gammaproteobacteria
GCC
Gly
>WENV180072087
MPMA02000320
480629
Gammaproteobacteria
GCA
Cys
>WENV180074622
MPMA02155566
480629
Gammaproteobacteria
GCA
Cys
>WENV180075739
MPMA02230339
480629
Gammaproteobacteria
GCA
Cys
>WENV180072829
MPMA02045087
178168
Gammaproteobacteria
ACG
Arg
>WENV180075049
MPMA02184712
243308
Gammaproteobacteria
TGG
Pro
>WENV180073038
MPMA02056823
182374
Gammaproteobacteria
CAT
Met
>WENV180075640
MPMA02223357
182374
Gammaproteobacteria
CAT
Met
>WENV180075656
MPMA02224415
182374
Gammaproteobacteria
CAT
Met
>WENV180072930
MPMA02050783
177028
Gammaproteobacteria
CAT
Met
>WENV180076135
MPMA02260081
370389
Gammaproteobacteria
GGC
Ala
>WENV180075235
MPMA02197100
176301
Gammaproteobacteria
GAT
Ile
>WENV180074423
MPMA02142336
176301
Gammaproteobacteria
GAT
Ile
>WENV180072949
MPMA02051621
176301
Gammaproteobacteria
GAT
Ile
>WENV180072091
MPMA02000437
176301
Gammaproteobacteria
GAT
Ile
>WENV180076140
MPMA02260299
281791
Gammaproteobacteria
GTG
His
>WENV180075556
MPMA02217678
281791
Gammaproteobacteria
GTG
His
>WENV180074340
MPMA02137765
281791
Gammaproteobacteria
GTG
His
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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