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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
20 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV180087861
MPMF02001119
282981
Alphaproteobacteria
CCA
Trp
>WENV180088221
MPMF02019033
400517
Alphaproteobacteria
GGT
Thr
>WENV180088265
MPMF02021834
281650
Alphaproteobacteria
CCA
Trp
>WENV180088385
MPMF02027473
73167
Alphaproteobacteria
GAG
Leu
>WENV180088572
MPMF02036031
100184
Alphaproteobacteria
CAG
Leu
>WENV180088638
MPMF02039575
221998
Alphaproteobacteria
GAT
Ile
>WENV180088775
MPMF02046728
296763
Alphaproteobacteria
CCA
Trp
>WENV180089083
MPMF02063508
419842
Alphaproteobacteria
GCC
Gly
>WENV180089223
MPMF02072015
233665
Alphaproteobacteria
CCT
Arg
>WENV180089675
MPMF02096719
313857
Alphaproteobacteria
TGC
Ala
>WENV180089708
MPMF02098277
399408
Alphaproteobacteria
TGT
Thr
>WENV180089930
MPMF02110246
140876
Alphaproteobacteria
>WENV180090314
MPMF02133773
178736
Alphaproteobacteria
CCT
Arg
>WENV180091318
MPMF02188285
221998
Alphaproteobacteria
GAT
Ile
>WENV180091620
MPMF02208012
404712
Alphaproteobacteria
CCC
Gly
>WENV180092255
MPMF02249780
180029
Alphaproteobacteria
CAT
Met
>WENV180092719
MPMF02278372
334158
Alphaproteobacteria
CTT
Lys
>WENV180092776
MPMF02281575
140893
Alphaproteobacteria
CAA
Leu
>WENV180092884
MPMF02288698
228484
Alphaproteobacteria
CCG
Arg
>WENV180093962
MPMF02357394
73986
Alphaproteobacteria
CAG
Leu
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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