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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
26 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV180089974
MPMF02113370
158246
Gammaproteobacteria
GTC
Asp
>WENV180091726
MPMF02216472
158246
Gammaproteobacteria
GTC
Asp
>WENV180092555
MPMF02266209
158246
Gammaproteobacteria
GTC
Asp
>WENV180093351
MPMF02315713
158246
Gammaproteobacteria
GTC
Asp
>WENV180091926
MPMF02228642
123265
Gammaproteobacteria
GAG
Leu
>WENV180092702
MPMF02277167
178164
Gammaproteobacteria
GAT
Ile
>WENV180087904
MPMF02003012
480653
Gammaproteobacteria
GCA
Cys
>WENV180090485
MPMF02141982
353123
Gammaproteobacteria
CCA
Trp
>WENV180092479
MPMF02262585
311084
Gammaproteobacteria
GCC
Gly
>WENV180091313
MPMF02187742
311084
Gammaproteobacteria
GCC
Gly
>WENV180091178
MPMF02180466
305254
Gammaproteobacteria
CCT
Arg
>WENV180092480
MPMF02262585
480629
Gammaproteobacteria
GCA
Cys
>WENV180089227
MPMF02072448
243308
Gammaproteobacteria
TGG
Pro
>WENV180093423
MPMF02319455
182374
Gammaproteobacteria
CAT
Met
>WENV180093194
MPMF02306160
182374
Gammaproteobacteria
CAT
Met
>WENV180092160
MPMF02243576
177028
Gammaproteobacteria
CAT
Met
>WENV180092647
MPMF02272325
176301
Gammaproteobacteria
GAT
Ile
>WENV180090256
MPMF02130598
176301
Gammaproteobacteria
GAT
Ile
>WENV180088229
MPMF02019694
176301
Gammaproteobacteria
GAT
Ile
>WENV180093152
MPMF02303572
211156
Gammaproteobacteria
CGG
Pro
>WENV180089983
MPMF02113820
211156
Gammaproteobacteria
CGG
Pro
>WENV180088092
MPMF02011849
211156
Gammaproteobacteria
CGG
Pro
>WENV180094108
MPMF02367336
117788
Gammaproteobacteria
TAG
Leu
>WENV180094110
MPMF02367336
117788
Gammaproteobacteria
TAG
Leu
>WENV180089996
MPMF02114269
201377
Gammaproteobacteria
TGG
Pro
>WENV180090031
MPMF02116086
349758
Gammaproteobacteria
GGC
Ala
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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