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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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Download
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
8 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV180100973
OAOT01028444
29841
Alphaproteobacteria
GGA
Ser
>WENV180100861
OAOT01002779
140876
Alphaproteobacteria
>WENV180100888
OAOT01006391
281659
Alphaproteobacteria
TGC
Ala
>WENV180100849
OAOT01001854
179941
Alphaproteobacteria
CAT
Met
>WENV180100877
OAOT01004133
29729
Alphaproteobacteria
GCT
Ser
>WENV180100914
OAOT01010649
281650
Alphaproteobacteria
CCA
Trp
>WENV180100934
OAOT01015094
215287
Alphaproteobacteria
GGG
Pro
>WENV180100912
OAOT01009867
329227
Alphaproteobacteria
TGC
Ala
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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