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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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Download
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
60 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV180168072
OAVP01008484
200563
Bacillota
TGG
Pro
>WENV180167798
OAVP01000364
403686
Bacillota
>WENV180168099
OAVP01010794
480520
Bacillota
TCC
Gly
>WENV180168052
OAVP01006668
184537
Bacillota
ACG
Arg
>WENV180167542
OAVP01000016
408526
Bacillota
GCA
Cys
>WENV180168103
OAVP01010872
296855
Bacillota
GGT
Thr
>WENV180167611
OAVP01000059
48505
Bacillota
TGA
Ser
>WENV180168010
OAVP01002487
289717
Bacillota
CTT
Lys
>WENV180167876
OAVP01000745
289717
Bacillota
CTT
Lys
>WENV180167708
OAVP01000207
289717
Bacillota
CTT
Lys
>WENV180168070
OAVP01008484
176018
Bacillota
CAT
Met
>WENV180168149
OAVP01020080
398915
Bacillota
TTC
Glu
>WENV180167978
OAVP01001710
20932
Bacillota
GCT
Ser
>WENV180167869
OAVP01000726
20932
Bacillota
GCT
Ser
>WENV180167650
OAVP01000097
20932
Bacillota
GCT
Ser
>WENV180167714
OAVP01000214
291553
Bacillota
GAA
Phe
>WENV180167540
OAVP01000016
291553
Bacillota
GAA
Phe
>WENV180168097
OAVP01010794
141334
Bacillota
TAG
Leu
>WENV180168092
OAVP01009852
482593
Bacillota
CCC
Gly
>WENV180168065
OAVP01008484
176014
Bacillota
TCT
Arg
>WENV180168113
OAVP01011929
339995
Bacillota
TGC
Ala
>WENV180167712
OAVP01000214
20942
Bacillota
GGA
Ser
>WENV180168096
OAVP01010794
283502
Bacillota
TTT
Lys
>WENV180168147
OAVP01019694
280646
Bacillota
TGC
Ala
>WENV180168017
OAVP01002895
100928
Bacillota
GAG
Leu
>WENV180168104
OAVP01010872
184495
Bacillota
CAT
Met
>WENV180167911
OAVP01001025
141202
Bacillota
CAA
Leu
>WENV180167532
OAVP01000009
141202
Bacillota
CAA
Leu
>WENV180167995
OAVP01002172
288953
Bacillota
GGT
Thr
>WENV180167785
OAVP01000329
314710
Bacillota
CGT
Thr
>WENV180168094
OAVP01010794
281302
Bacillota
GTG
His
>WENV180167838
OAVP01000532
20854
Bacillota
CGA
Ser
>WENV180168060
OAVP01007616
289713
Bacillota
TGT
Thr
>WENV180167918
OAVP01001065
289713
Bacillota
TGT
Thr
>WENV180168120
OAVP01012836
404091
Bacillota
TTG
Gln
>WENV180168119
OAVP01012836
289716
Bacillota
GTG
His
>WENV180167988
OAVP01001983
432453
Bacillota
TTC
Glu
>WENV180168138
OAVP01017874
480337
Bacillota
TCC
Gly
>WENV180167649
OAVP01000093
119459
Bacillota
TAG
Leu
>WENV180167986
OAVP01001983
333281
Bacillota
GTT
Asn
>WENV180168156
OAVP01025994
333281
Bacillota
GTT
Asn
>WENV180168027
OAVP01004216
119281
Bacillota
>WENV180167713
OAVP01000214
280547
Bacillota
GTC
Asp
>WENV180167539
OAVP01000016
280547
Bacillota
GTC
Asp
>WENV180168076
OAVP01009111
127792
Bacillota
TAG
Leu
>WENV180168157
OAVP01025994
289761
Bacillota
TTT
Lys
>WENV180168121
OAVP01012836
289761
Bacillota
TTT
Lys
>WENV180167987
OAVP01001983
289761
Bacillota
TTT
Lys
>WENV180168100
OAVP01010794
203851
Bacillota
TCT
Arg
>WENV180168151
OAVP01021302
13616
Bacillota
GGA
Ser
>WENV180167953
OAVP01001466
320075
Bacillota
GAA
Phe
>WENV180168085
OAVP01009488
120847
Bacillota
TAG
Leu
>WENV180168031
OAVP01004487
289715
Bacillota
TAC
Val
>WENV180167989
OAVP01001983
289715
Bacillota
TAC
Val
>WENV180167980
OAVP01001922
289715
Bacillota
TAC
Val
>WENV180167747
OAVP01000259
20943
Bacillota
CGA
Ser
>WENV180168137
OAVP01017874
208539
Bacillota
TGG
Pro
>WENV180168139
OAVP01017874
184539
Bacillota
TCT
Arg
>WENV180167884
OAVP01000786
183839
Bacillota
TCT
Arg
>WENV180168084
OAVP01009488
317918
Bacillota
TTT
Lys
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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