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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
23 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV180287180
OBIK01000942
184105
Campylobacterota
GAT
Ile
>WENV180287206
OBIK01001759
405530
Campylobacterota
GTT
Asn
>WENV180287136
OBIK01000004
401782
Campylobacterota
GTT
Asn
>WENV180287137
OBIK01000004
401782
Campylobacterota
GTT
Asn
>WENV180287260
OBIK01006999
443096
Campylobacterota
GGT
Thr
>WENV180287253
OBIK01005835
344836
Campylobacterota
CCA
Trp
>WENV180287460
OBIK01066702
421045
Campylobacterota
TTC
Glu
>WENV180287183
OBIK01001084
188383
Campylobacterota
TGT
Thr
>WENV180287256
OBIK01006398
289263
Campylobacterota
GTT
Asn
>WENV180287193
OBIK01001372
220633
Campylobacterota
TCC
Gly
>WENV180287144
OBIK01000014
294045
Campylobacterota
TAC
Val
>WENV180287340
OBIK01022800
294045
Campylobacterota
TAC
Val
>WENV180287360
OBIK01030054
294045
Campylobacterota
TAC
Val
>WENV180287362
OBIK01030059
294045
Campylobacterota
TAC
Val
>WENV180287376
OBIK01037160
294045
Campylobacterota
TAC
Val
>WENV180287378
OBIK01037162
294045
Campylobacterota
TAC
Val
>WENV180287382
OBIK01037651
294045
Campylobacterota
TAC
Val
>WENV180287473
OBIK01072912
294045
Campylobacterota
TAC
Val
>WENV180287612
OBIK01159596
294045
Campylobacterota
TAC
Val
>WENV180287215
OBIK01002251
289267
Campylobacterota
TAC
Val
>WENV180287181
OBIK01000942
289268
Campylobacterota
TGC
Ala
>WENV180287216
OBIK01002251
184104
Campylobacterota
GTC
Asp
>WENV180287153
OBIK01000133
398990
Campylobacterota
GCC
Gly
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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