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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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Download
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
19 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV180361009
OBNU01085398
358471
Alphaproteobacteria
TGC
Ala
>WENV180360832
OBNU01033657
29841
Alphaproteobacteria
GGA
Ser
>WENV180361001
OBNU01082078
140876
Alphaproteobacteria
>WENV180360990
OBNU01078140
77714
Alphaproteobacteria
CAG
Leu
>WENV180360887
OBNU01048609
353346
Alphaproteobacteria
CAT
Met
>WENV180360847
OBNU01037869
78115
Alphaproteobacteria
GAG
Leu
>WENV180360869
OBNU01043443
340918
Alphaproteobacteria
CGT
Thr
>WENV180361032
OBNU01092134
140932
Alphaproteobacteria
>WENV180360710
OBNU01013079
176153
Alphaproteobacteria
CAT
Met
>WENV180361062
OBNU01100988
398999
Alphaproteobacteria
GGT
Thr
>WENV180360811
OBNU01029682
435083
Alphaproteobacteria
>WENV180360919
OBNU01057824
178503
Alphaproteobacteria
GGG
Pro
>WENV180360828
OBNU01032884
400544
Alphaproteobacteria
GGT
Thr
>WENV180360806
OBNU01027927
178728
Alphaproteobacteria
CGG
Pro
>WENV180361034
OBNU01092461
453762
Alphaproteobacteria
CAC
Val
>WENV180360969
OBNU01073246
432650
Alphaproteobacteria
GAA
Phe
>WENV180360946
OBNU01067655
145313
Alphaproteobacteria
>WENV180360947
OBNU01067655
428327
Alphaproteobacteria
GCC
Gly
>WENV180361107
OBNU01122093
398996
Alphaproteobacteria
GCC
Gly
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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