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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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Download
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
13 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV180398826
OBQB01001491
96435
Gammaproteobacteria
TAA
Leu
>WENV180398894
OBQB01021450
140426
Gammaproteobacteria
TAG
Leu
>WENV180398904
OBQB01025772
280810
Gammaproteobacteria
GTG
His
>WENV180398909
OBQB01026712
280808
Gammaproteobacteria
>WENV180398840
OBQB01003523
285363
Gammaproteobacteria
TGT
Thr
>WENV180398850
OBQB01005614
121740
Gammaproteobacteria
TAG
Leu
>WENV180398845
OBQB01004714
508107
Gammaproteobacteria
GCA
Cys
>WENV180398916
OBQB01030679
284865
Gammaproteobacteria
>WENV180398906
OBQB01026446
370865
Gammaproteobacteria
TAC
Val
>WENV180398908
OBQB01026712
238652
Gammaproteobacteria
CAT
Met
>WENV180398915
OBQB01030679
282674
Gammaproteobacteria
GGC
Ala
>WENV180398824
OBQB01001491
308361
Gammaproteobacteria
GCC
Gly
>WENV180398825
OBQB01001491
482480
Gammaproteobacteria
GCA
Cys
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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